RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 HERVK_113P61574 105 aa11.18□□□□□ -0.62
LIME1-208ENST00000493265 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
LIME1-208ENST00000493265 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
LIME1-208ENST00000493265 Q8IZM0 81 aa11.18□□□□□ -0.62
LIME1-208ENST00000493265 STPG4Q8N801 248 aa11.18□□□□□ -0.62
LIME1-208ENST00000493265 IGLV5-39A0A0G2JS06 123 aa11.17□□□□□ -0.62
LIME1-208ENST00000493265 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
LIME1-208ENST00000493265 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
LIME1-208ENST00000493265 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
LIME1-208ENST00000493265 NDUFA1O15239 70 aa11.16□□□□□ -0.62
LIME1-208ENST00000493265 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
LIME1-208ENST00000493265 Q6ZRU5 148 aa11.16□□□□□ -0.62
LIME1-208ENST00000493265 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
LIME1-208ENST00000493265 AKR1D1P51857 326 aa11.15□□□□□ -0.62
LIME1-208ENST00000493265 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
LIME1-208ENST00000493265 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
LIME1-208ENST00000493265 APOBP04114 4563 aaKnown RBP11.13□□□□□ -0.63
LIME1-208ENST00000493265 LEPROTO15243 131 aa11.13□□□□□ -0.63
LIME1-208ENST00000493265 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
LIME1-208ENST00000493265 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
LIME1-208ENST00000493265 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
LIME1-208ENST00000493265 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
LIME1-208ENST00000493265 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
LIME1-208ENST00000493265 GCSHP23434 173 aa11.11□□□□□ -0.63
LIME1-208ENST00000493265 CXCL5P42830 114 aa11.11□□□□□ -0.63
LIME1-208ENST00000493265 C9orf116Q5BN46 136 aaPredicted RBP11.11□□□□□ -0.63
LIME1-208ENST00000493265 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
LIME1-208ENST00000493265 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
LIME1-208ENST00000493265 C6orf48Q9UBA6 75 aa11.11□□□□□ -0.63
LIME1-208ENST00000493265 E9PLD3 99 aa11.1□□□□□ -0.63
LIME1-208ENST00000493265 F8WDY8 70 aa11.1□□□□□ -0.63
LIME1-208ENST00000493265 J3QQQ9 107 aa11.1□□□□□ -0.63
LIME1-208ENST00000493265 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
LIME1-208ENST00000493265 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
LIME1-208ENST00000493265 ANKRD39Q53RE8 183 aa11.1□□□□□ -0.63
LIME1-208ENST00000493265 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
LIME1-208ENST00000493265 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
LIME1-208ENST00000493265 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
LIME1-208ENST00000493265 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
LIME1-208ENST00000493265 NMUP48645 174 aa11.08□□□□□ -0.64
LIME1-208ENST00000493265 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
LIME1-208ENST00000493265 KRTAP10-1P60331 282 aa11.07□□□□□ -0.64
LIME1-208ENST00000493265 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
LIME1-208ENST00000493265 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
LIME1-208ENST00000493265 PYY3Q5JQD4 70 aa11.06□□□□□ -0.64
LIME1-208ENST00000493265 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
LIME1-208ENST00000493265 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
LIME1-208ENST00000493265 PFN2P35080 140 aa11.05□□□□□ -0.64
LIME1-208ENST00000493265 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
LIME1-208ENST00000493265 Q8N1X5 172 aa11.05□□□□□ -0.64
LIME1-208ENST00000493265 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
LIME1-208ENST00000493265 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
LIME1-208ENST00000493265 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
LIME1-208ENST00000493265 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 MEIG1Q5JSS6 88 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 SFTA2Q6UW10 78 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
LIME1-208ENST00000493265 A0A096LNI7 61 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 VAMP8Q9BV40 100 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 ERG28Q9UKR5 140 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 PAM16Q9Y3D7 125 aa11.02□□□□□ -0.65
LIME1-208ENST00000493265 HERC1Q15751 4861 aa11.01□□□□□ -0.65
LIME1-208ENST00000493265 LOC105371267A0A1B0GV96 52 aa11.01□□□□□ -0.65
LIME1-208ENST00000493265 LINC00158P58513 81 aa11.01□□□□□ -0.65
LIME1-208ENST00000493265 HERV-K104P63124 156 aa11.01□□□□□ -0.65
LIME1-208ENST00000493265 PCP2Q8IVA1 136 aa11.01□□□□□ -0.65
LIME1-208ENST00000493265 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
LIME1-208ENST00000493265 Q6ZRP5 223 aa11□□□□□ -0.65
LIME1-208ENST00000493265 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
LIME1-208ENST00000493265 PANO1I0J062 215 aa10.99□□□□□ -0.65
LIME1-208ENST00000493265 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
LIME1-208ENST00000493265 SPATA45Q537H7 98 aa10.99□□□□□ -0.65
LIME1-208ENST00000493265 FAM30AQ9NZY2 134 aa10.99□□□□□ -0.65
LIME1-208ENST00000493265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
LIME1-208ENST00000493265 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
LIME1-208ENST00000493265 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
LIME1-208ENST00000493265 HAMPP81172 84 aa10.98□□□□□ -0.65
LIME1-208ENST00000493265 A0A0J9YXY3 114 aa10.97□□□□□ -0.65
LIME1-208ENST00000493265 XAGE1AQ9HD64 81 aa10.97□□□□□ -0.65
LIME1-208ENST00000493265 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
LIME1-208ENST00000493265 COX17Q14061 63 aa10.95□□□□□ -0.66
LIME1-208ENST00000493265 DAND5Q8N907 189 aa10.95□□□□□ -0.66
LIME1-208ENST00000493265 TP73-AS1Q9UF72 201 aa10.95□□□□□ -0.66
LIME1-208ENST00000493265 LINC00587B1AMM8 73 aa10.94□□□□□ -0.66
LIME1-208ENST00000493265 CIRBPQ14011 172 aaKnown RBP10.94□□□□□ -0.66
LIME1-208ENST00000493265 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
LIME1-208ENST00000493265 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
LIME1-208ENST00000493265 S100A12P80511 92 aa10.93□□□□□ -0.66
LIME1-208ENST00000493265 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
LIME1-208ENST00000493265 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
LIME1-208ENST00000493265 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
LIME1-208ENST00000493265 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
LIME1-208ENST00000493265 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
LIME1-208ENST00000493265 COX8AP10176 69 aa10.91□□□□□ -0.66
LIME1-208ENST00000493265 NPC2P61916 151 aa10.91□□□□□ -0.66
LIME1-208ENST00000493265 ADAMTSL4-AS1Q5T5F5 129 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms