RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
MCF2L-230ENST00000491028 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
MCF2L-230ENST00000491028 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
MCF2L-230ENST00000491028 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
MCF2L-230ENST00000491028 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
MCF2L-230ENST00000491028 SLPIP03973 132 aa12.12□□□□□ -0.47
MCF2L-230ENST00000491028 NMUP48645 174 aa12.12□□□□□ -0.47
MCF2L-230ENST00000491028 Q6ZRU5 148 aa12.12□□□□□ -0.47
MCF2L-230ENST00000491028 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
MCF2L-230ENST00000491028 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 RNF151Q2KHN1 245 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 UNQ6190/PRO20217Q6UXQ8 127 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-230ENST00000491028 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
MCF2L-230ENST00000491028 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
MCF2L-230ENST00000491028 SMIM6P0DI80 62 aa12.1□□□□□ -0.47
MCF2L-230ENST00000491028 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
MCF2L-230ENST00000491028 FAT2Q9NYQ8 4349 aa12.09□□□□□ -0.47
MCF2L-230ENST00000491028 IGLV5-52A0A0A0MRZ9 124 aa12.09□□□□□ -0.47
MCF2L-230ENST00000491028 A0A1B0GVY2 172 aa12.09□□□□□ -0.47
MCF2L-230ENST00000491028 HERV-K104P63124 156 aa12.09□□□□□ -0.47
MCF2L-230ENST00000491028 C10orf25Q5T742 122 aa12.09□□□□□ -0.47
MCF2L-230ENST00000491028 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
MCF2L-230ENST00000491028 C6orf48Q9UBA6 75 aa12.08□□□□□ -0.48
MCF2L-230ENST00000491028 PAM16Q9Y3D7 125 aa12.08□□□□□ -0.48
MCF2L-230ENST00000491028 KRTAP10-2P60368 255 aa12.07□□□□□ -0.48
MCF2L-230ENST00000491028 SPATA45Q537H7 98 aa12.07□□□□□ -0.48
MCF2L-230ENST00000491028 PKIGQ9Y2B9 76 aa12.07□□□□□ -0.48
MCF2L-230ENST00000491028 S100A12P80511 92 aa12.06□□□□□ -0.48
MCF2L-230ENST00000491028 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
MCF2L-230ENST00000491028 TTTY13Q9BZ97 58 aa12.04□□□□□ -0.48
MCF2L-230ENST00000491028 DNAH11Q96DT5 4516 aa12.03□□□□□ -0.48
MCF2L-230ENST00000491028 LINC00587B1AMM8 73 aa12.03□□□□□ -0.48
MCF2L-230ENST00000491028 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
MCF2L-230ENST00000491028 ERG28Q9UKR5 140 aa12.03□□□□□ -0.48
MCF2L-230ENST00000491028 TLX1NBP0CAT3 122 aa12.02□□□□□ -0.49
MCF2L-230ENST00000491028 COX17Q14061 63 aa12.02□□□□□ -0.49
MCF2L-230ENST00000491028 PKD1P98161 4303 aa12.01□□□□□ -0.49
MCF2L-230ENST00000491028 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
MCF2L-230ENST00000491028 COX8AP10176 69 aa12.01□□□□□ -0.49
MCF2L-230ENST00000491028 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
MCF2L-230ENST00000491028 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-230ENST00000491028 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
MCF2L-230ENST00000491028 A0A0J9YXY3 114 aa12□□□□□ -0.49
MCF2L-230ENST00000491028 NDUFC2-KCTD14E9PQ53 114 aa12□□□□□ -0.49
MCF2L-230ENST00000491028 DLEU1O43261 78 aa11.99□□□□□ -0.49
MCF2L-230ENST00000491028 GCSHP23434 173 aa11.99□□□□□ -0.49
MCF2L-230ENST00000491028 BOD1L2Q8IYS8 172 aa11.99□□□□□ -0.49
MCF2L-230ENST00000491028 PFN2P35080 140 aa11.98□□□□□ -0.49
MCF2L-230ENST00000491028 SCGB1D4Q6XE38 83 aa11.98□□□□□ -0.49
MCF2L-230ENST00000491028 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
MCF2L-230ENST00000491028 TIMM17BO60830 172 aa11.97□□□□□ -0.49
MCF2L-230ENST00000491028 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
MCF2L-230ENST00000491028 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
MCF2L-230ENST00000491028 LINC01620Q4KN68 170 aa11.97□□□□□ -0.49
MCF2L-230ENST00000491028 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
MCF2L-230ENST00000491028 LINC00158P58513 81 aa11.96□□□□□ -0.49
MCF2L-230ENST00000491028 SLC25A34Q6PIV7 304 aa11.96□□□□□ -0.49
MCF2L-230ENST00000491028 Q6ZRP5 223 aa11.96□□□□□ -0.49
MCF2L-230ENST00000491028 C14orf144Q96I85 54 aa11.96□□□□□ -0.49
MCF2L-230ENST00000491028 C16orf90A8MZG2 172 aa11.95□□□□□ -0.5
MCF2L-230ENST00000491028 C12orf57Q99622 126 aa11.95□□□□□ -0.5
MCF2L-230ENST00000491028 HECTD4Q9Y4D8 3996 aa11.94□□□□□ -0.5
MCF2L-230ENST00000491028 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
MCF2L-230ENST00000491028 A0A096LNI7 61 aa11.93□□□□□ -0.5
MCF2L-230ENST00000491028 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
MCF2L-230ENST00000491028 TMEM238C9JI98 176 aa11.93□□□□□ -0.5
MCF2L-230ENST00000491028 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
MCF2L-230ENST00000491028 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
MCF2L-230ENST00000491028 LINC00518Q8N0U6 118 aa11.92□□□□□ -0.5
MCF2L-230ENST00000491028 MIR7-3HGQ8N6C7 128 aa11.92□□□□□ -0.5
MCF2L-230ENST00000491028 LITAFQ99732 161 aa11.92□□□□□ -0.5
MCF2L-230ENST00000491028 DNAH5Q8TE73 4624 aa11.92□□□□□ -0.5
MCF2L-230ENST00000491028 GAGE2EQ4V326 116 aa11.91□□□□□ -0.5
MCF2L-230ENST00000491028 GAGE2DQ9UEU5 116 aa11.91□□□□□ -0.5
MCF2L-230ENST00000491028 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
MCF2L-230ENST00000491028 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
MCF2L-230ENST00000491028 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
MCF2L-230ENST00000491028 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.5
MCF2L-230ENST00000491028 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
MCF2L-230ENST00000491028 ADAMTSL4-AS1Q5T5F5 129 aa11.89□□□□□ -0.51
MCF2L-230ENST00000491028 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
MCF2L-230ENST00000491028 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
MCF2L-230ENST00000491028 SPANXB1Q9NS25 103 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-230ENST00000491028 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
MCF2L-230ENST00000491028 CHTF8P0CG12 524 aa11.88□□□□□ -0.51
MCF2L-230ENST00000491028 Q6ZSA8 131 aa11.88□□□□□ -0.51
MCF2L-230ENST00000491028 Q6ZVH6 145 aa11.88□□□□□ -0.51
MCF2L-230ENST00000491028 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
MCF2L-230ENST00000491028 HIGD1BQ9P298 99 aa11.88□□□□□ -0.51
MCF2L-230ENST00000491028 C9orf129Q5T035 196 aaKnown RBP11.87□□□□□ -0.51
MCF2L-230ENST00000491028 DAND5Q8N907 189 aa11.87□□□□□ -0.51
MCF2L-230ENST00000491028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-230ENST00000491028 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
MCF2L-230ENST00000491028 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
MCF2L-230ENST00000491028 LOC107984156A0A0G2JMH3 177 aa11.85□□□□□ -0.51
MCF2L-230ENST00000491028 PANO1I0J062 215 aa11.85□□□□□ -0.51
MCF2L-230ENST00000491028 ARL17AQ8IVW1 177 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms