RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CCL18P55774 89 aa13.65□□□□□ -0.22
SNAPC3-206ENST00000490969 USP17L23D6RBM5 183 aa13.64□□□□□ -0.23
SNAPC3-206ENST00000490969 UBE2L6O14933 153 aa13.64□□□□□ -0.23
SNAPC3-206ENST00000490969 KIR2DL5BQ8NHK3 375 aa13.64□□□□□ -0.23
SNAPC3-206ENST00000490969 DPH3Q96FX2 82 aa13.64□□□□□ -0.23
SNAPC3-206ENST00000490969 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
SNAPC3-206ENST00000490969 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
SNAPC3-206ENST00000490969 HIVEP1P15822 2718 aa13.63□□□□□ -0.23
SNAPC3-206ENST00000490969 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
SNAPC3-206ENST00000490969 Q6ZTI0 123 aa13.62□□□□□ -0.23
SNAPC3-206ENST00000490969 SETXQ7Z333 2677 aaKnown RBP13.62□□□□□ -0.23
SNAPC3-206ENST00000490969 WNK1Q9H4A3 2382 aa13.61□□□□□ -0.23
SNAPC3-206ENST00000490969 SLPIP03973 132 aa13.61□□□□□ -0.23
SNAPC3-206ENST00000490969 C1orf158Q8N1D5 194 aa13.61□□□□□ -0.23
SNAPC3-206ENST00000490969 DYNLRB2Q8TF09 96 aa13.61□□□□□ -0.23
SNAPC3-206ENST00000490969 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
SNAPC3-206ENST00000490969 NIPBLQ6KC79 2804 aaeCLIP13.59□□□□□ -0.23
SNAPC3-206ENST00000490969 FN1P02751 2386 aaKnown RBP13.58□□□□□ -0.23
SNAPC3-206ENST00000490969 IGKV3OR2-268A0A0C4DH90 116 aa13.58□□□□□ -0.23
SNAPC3-206ENST00000490969 IBA57-AS1B1ANH7 110 aa13.58□□□□□ -0.23
SNAPC3-206ENST00000490969 DSCR8Q96T75 97 aa13.58□□□□□ -0.23
SNAPC3-206ENST00000490969 PAX4O43316 350 aa13.58□□□□□ -0.24
SNAPC3-206ENST00000490969 SS18Q15532 418 aa13.58□□□□□ -0.24
SNAPC3-206ENST00000490969 PFN2P35080 140 aa13.57□□□□□ -0.24
SNAPC3-206ENST00000490969 ORMDL1Q9P0S3 153 aa13.57□□□□□ -0.24
SNAPC3-206ENST00000490969 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
SNAPC3-206ENST00000490969 OXTP01178 125 aa13.56□□□□□ -0.24
SNAPC3-206ENST00000490969 CCKP06307 115 aa13.56□□□□□ -0.24
SNAPC3-206ENST00000490969 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
SNAPC3-206ENST00000490969 NSD1Q96L73 2696 aaPredicted RBP13.55□□□□□ -0.24
SNAPC3-206ENST00000490969 IGHV3OR16-9A0A0B4J2B5 98 aa13.55□□□□□ -0.24
SNAPC3-206ENST00000490969 LY6G6DO95868 133 aa13.54□□□□□ -0.24
SNAPC3-206ENST00000490969 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
SNAPC3-206ENST00000490969 TRBV6-4A0A1B0GX49 114 aa13.54□□□□□ -0.24
SNAPC3-206ENST00000490969 STHQ8IWL8 128 aa13.54□□□□□ -0.24
SNAPC3-206ENST00000490969 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.24
SNAPC3-206ENST00000490969 HILS1P60008 231 aa13.52□□□□□ -0.24
SNAPC3-206ENST00000490969 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.25
SNAPC3-206ENST00000490969 S100A7L2Q5SY68 101 aa13.52□□□□□ -0.25
SNAPC3-206ENST00000490969 TMEM86BQ8N661 226 aa13.52□□□□□ -0.25
SNAPC3-206ENST00000490969 NOP10Q9NPE3 64 aaKnown RBP13.52□□□□□ -0.25
SNAPC3-206ENST00000490969 A0A087WZ39 114 aa13.51□□□□□ -0.25
SNAPC3-206ENST00000490969 KHDC1LQ5JSQ8 128 aa13.51□□□□□ -0.25
SNAPC3-206ENST00000490969 FHL2Q14192 279 aa13.5□□□□□ -0.25
SNAPC3-206ENST00000490969 C4orf3Q8WVX3 66 aa13.5□□□□□ -0.25
SNAPC3-206ENST00000490969 GHRHP01286 108 aa13.49□□□□□ -0.25
SNAPC3-206ENST00000490969 ATP5EP2Q5VTU8 51 aa13.49□□□□□ -0.25
SNAPC3-206ENST00000490969 WFDC9Q8NEX5 89 aa13.49□□□□□ -0.25
SNAPC3-206ENST00000490969 LINC00167Q96N53 147 aa13.49□□□□□ -0.25
SNAPC3-206ENST00000490969 JMJD7-PLA2G4BH0Y9G9 81 aa13.48□□□□□ -0.25
SNAPC3-206ENST00000490969 WIPF1O43516 503 aa13.47□□□□□ -0.25
SNAPC3-206ENST00000490969 TRAV23DV6A0A075B6W5 121 aa13.47□□□□□ -0.25
SNAPC3-206ENST00000490969 A0A1W2PRX2 142 aa13.47□□□□□ -0.25
SNAPC3-206ENST00000490969 C11orf68Q9H3H3 251 aaKnown RBP13.47□□□□□ -0.25
SNAPC3-206ENST00000490969 NOTCH3Q9UM47 2321 aa13.46□□□□□ -0.25
SNAPC3-206ENST00000490969 TRGV2A0A075B6R0 118 aa13.46□□□□□ -0.25
SNAPC3-206ENST00000490969 LINC01006Q8NI28 216 aa13.46□□□□□ -0.26
SNAPC3-206ENST00000490969 C4orf26Q17RF5 130 aa13.45□□□□□ -0.26
SNAPC3-206ENST00000490969 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
SNAPC3-206ENST00000490969 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
SNAPC3-206ENST00000490969 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
SNAPC3-206ENST00000490969 Q8N814 137 aa13.45□□□□□ -0.26
SNAPC3-206ENST00000490969 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 Q5XG85 94 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 F8P00451 2351 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 NDUFC2O95298 119 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 LYPD5Q6UWN5 251 aa13.44□□□□□ -0.26
SNAPC3-206ENST00000490969 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
SNAPC3-206ENST00000490969 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
SNAPC3-206ENST00000490969 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
SNAPC3-206ENST00000490969 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
SNAPC3-206ENST00000490969 TRGV4A0A0C4DH28 118 aa13.42□□□□□ -0.26
SNAPC3-206ENST00000490969 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
SNAPC3-206ENST00000490969 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
SNAPC3-206ENST00000490969 HRCT1Q6UXD1 115 aa13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 TENM1Q9UKZ4 2725 aa13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 TRBV10-3A0A0K0K1G6 114 aa13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 PRR3P79522 188 aaKnown RBP13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 C16orf74Q96GX8 76 aa13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 UBL5Q9BZL1 73 aa13.4□□□□□ -0.26
SNAPC3-206ENST00000490969 TEP1Q99973 2627 aaKnown RBP13.39□□□□□ -0.27
SNAPC3-206ENST00000490969 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
SNAPC3-206ENST00000490969 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
SNAPC3-206ENST00000490969 VWFP04275 2813 aa13.37□□□□□ -0.27
SNAPC3-206ENST00000490969 XCL1P47992 114 aa13.37□□□□□ -0.27
SNAPC3-206ENST00000490969 Q8IZM0 81 aa13.36□□□□□ -0.27
SNAPC3-206ENST00000490969 C16orf95Q9H693 158 aa13.36□□□□□ -0.27
SNAPC3-206ENST00000490969 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
SNAPC3-206ENST00000490969 KRTAP10-3P60369 221 aa13.35□□□□□ -0.27
SNAPC3-206ENST00000490969 FAM236DA0A1B0GTK5 79 aa13.34□□□□□ -0.27
SNAPC3-206ENST00000490969 FAM236CP0DP71 79 aa13.34□□□□□ -0.27
SNAPC3-206ENST00000490969 CCL24O00175 119 aa13.32□□□□□ -0.28
SNAPC3-206ENST00000490969 ATRQ13535 2644 aa13.32□□□□□ -0.28
SNAPC3-206ENST00000490969 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
SNAPC3-206ENST00000490969 CYSRT1A8MQ03 144 aa13.3□□□□□ -0.28
SNAPC3-206ENST00000490969 Q6ZQT0 140 aa13.3□□□□□ -0.28
SNAPC3-206ENST00000490969 RPL35AP18077 110 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms