RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 IGKV2-24A0A0C4DH68 120 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 ZNF561-AS1K7EIQ3 104 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 COX7A2LO14548 114 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 NUPR1O60356 82 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 PDZD11Q5EBL8 140 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 Q6ZUT4 128 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 ERASQ7Z444 233 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 C7orf33Q8WU49 177 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 SCGB3A1Q96QR1 104 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 TIMM17AQ99595 171 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 PLA2G2DQ9UNK4 145 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 PYGO1Q9Y3Y4 419 aa6.06□□□□□ -1.44
TMEM39A-210ENST00000490099 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 A0A096LNJ9 63 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 TRAV13-1A0A0B4J241 112 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 RNASE13Q5GAN3 156 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 Q6ZN92 141 aa6.05□□□□□ -1.44
TMEM39A-210ENST00000490099 F8WDY8 70 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 APOMO95445 188 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 FABP4P15090 132 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 IFI27L1Q96BM0 104 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 LINC01600Q96MT4 127 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 OPRPNQ99935 248 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 MAP1LC3CQ9BXW4 147 aa6.04□□□□□ -1.44
TMEM39A-210ENST00000490099 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 IGIPA6NJ69 53 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 MALP21145 153 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 AKR1D1P51857 326 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 C5orf38Q86SI9 138 aa6.03□□□□□ -1.44
TMEM39A-210ENST00000490099 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 TEX43Q6ZNM6 134 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 OR10D4PQ8NGN7 298 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 CAMK2N2Q96S95 79 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 C2orf88Q9BSF0 95 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 VCX2Q9H322 139 aa6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 MRPL35Q9NZE8 188 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-210ENST00000490099 IGLV4-3A0A075B6K6 122 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 C20orf202A1L168 122 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 KRTDAPP60985 99 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 KIAA0087Q14695 138 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 PMVKQ15126 192 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 Q6ZRP5 223 aa6.01□□□□□ -1.45
TMEM39A-210ENST00000490099 A0A087WZ39 114 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 IFITM10A6NMD0 228 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 SPAG11BQ08648 103 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 GAGE2BQ13066 116 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
TMEM39A-210ENST00000490099 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 PET117Q6UWS5 81 aa6□□□□□ -1.45
TMEM39A-210ENST00000490099 TNXBP22105 4242 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 A0A0J9YXV3 536 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 H0Y8G0 127 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 C3orf79P0CE67 100 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 SEC11AP67812 179 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 LINC01561Q8N1V8 128 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 AMELXQ99217 191 aa5.99□□□□□ -1.45
TMEM39A-210ENST00000490099 UBE2D1P51668 147 aa5.98□□□□□ -1.45
TMEM39A-210ENST00000490099 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
TMEM39A-210ENST00000490099 ORAOV1Q8WV07 137 aa5.98□□□□□ -1.45
TMEM39A-210ENST00000490099 CST9LQ9H4G1 147 aa5.98□□□□□ -1.45
TMEM39A-210ENST00000490099 CHTOPQ9Y3Y2 248 aaKnown RBP5.98□□□□□ -1.45
TMEM39A-210ENST00000490099 F8VRH5 84 aa5.97□□□□□ -1.45
TMEM39A-210ENST00000490099 PLNP26678 52 aa5.97□□□□□ -1.45
TMEM39A-210ENST00000490099 FAM19A3Q7Z5A8 133 aa5.97□□□□□ -1.45
TMEM39A-210ENST00000490099 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
TMEM39A-210ENST00000490099 PSORS1C2Q9UIG4 136 aa5.97□□□□□ -1.45
TMEM39A-210ENST00000490099 NDUFA1O15239 70 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 DPM2O94777 84 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 SCGB1D1O95968 90 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 HERVK_113P63121 156 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 ODF1Q14990 250 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
TMEM39A-210ENST00000490099 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 TINCRA0A1B0GVN0 87 aa5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 IGKCP01834 107 aa5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 IGLC3P0DOY3 106 aa5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 JOSD1Q15040 202 aaPredicted RBP5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 GEMIN7Q9H840 131 aaKnown RBP5.95□□□□□ -1.46
TMEM39A-210ENST00000490099 TRBV30A0A0K0K1B3 111 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms