RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 PREX1Q8TCU6 1659 aa1.79□□□□□ -2.12
KDM3A-213ENST00000488971 FMN2Q9NZ56 1722 aa1.79□□□□□ -2.12
KDM3A-213ENST00000488971 SIPA1L3O60292 1781 aaPredicted RBP1.79□□□□□ -2.12
KDM3A-213ENST00000488971 SPAG17Q6Q759 2223 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 TNRC6BQ9UPQ9 1833 aaKnown RBP1.78□□□□□ -2.12
KDM3A-213ENST00000488971 NUP188Q5SRE5 1749 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 PHRF1Q9P1Y6 1649 aaKnown RBP1.78□□□□□ -2.12
KDM3A-213ENST00000488971 A0A087WVE0 104 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 LOC110117498A0A087WWA1 95 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 MGPP08493 103 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
KDM3A-213ENST00000488971 BAGE3Q86Y29 109 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 FDCSPQ8NFU4 85 aa1.78□□□□□ -2.12
KDM3A-213ENST00000488971 XRN1Q8IZH2 1706 aaKnown RBP1.77□□□□□ -2.13
KDM3A-213ENST00000488971 ARFGEF3Q5TH69 2177 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 BAZ2BQ9UIF8 2168 aaKnown RBP1.77□□□□□ -2.13
KDM3A-213ENST00000488971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.77□□□□□ -2.13
KDM3A-213ENST00000488971 A0A087WTM6 91 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 A0A0D9SFI3 127 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 H3BVH4 76 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 M0R2N4 97 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 FXYD4P59646 89 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 TOMM5Q8N4H5 51 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 ZNF625Q96I27 306 aaPredicted RBP1.77□□□□□ -2.13
KDM3A-213ENST00000488971 WFDC6Q9BQY6 131 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 GNG13Q9P2W3 67 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 PCDH15Q96QU1 1955 aa1.77□□□□□ -2.13
KDM3A-213ENST00000488971 SAMD9LQ8IVG5 1584 aa1.76□□□□□ -2.13
KDM3A-213ENST00000488971 C3orf79P0CE67 100 aa1.76□□□□□ -2.13
KDM3A-213ENST00000488971 LINC00208Q96KT6 92 aa1.76□□□□□ -2.13
KDM3A-213ENST00000488971 PKD1L3Q7Z443 1732 aa1.76□□□□□ -2.13
KDM3A-213ENST00000488971 FREM1Q5H8C1 2179 aa1.76□□□□□ -2.13
KDM3A-213ENST00000488971 PARP4Q9UKK3 1724 aaKnown RBP1.75□□□□□ -2.13
KDM3A-213ENST00000488971 TRAV1-2A0A0B4J238 106 aa1.75□□□□□ -2.13
KDM3A-213ENST00000488971 COX17Q14061 63 aa1.75□□□□□ -2.13
KDM3A-213ENST00000488971 GDF5OSQ5U4N7 250 aa1.75□□□□□ -2.13
KDM3A-213ENST00000488971 CICQ96RK0 1608 aaPredicted RBP1.75□□□□□ -2.13
KDM3A-213ENST00000488971 MYO7BQ6PIF6 2116 aa1.75□□□□□ -2.13
KDM3A-213ENST00000488971 HIVEP2P31629 2446 aa1.75□□□□□ -2.13
KDM3A-213ENST00000488971 C5P01031 1676 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 COL4A1P02462 1669 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 ANKRD36A6QL64 1941 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 ALPK2Q86TB3 2170 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 DOCK10Q96BY6 2186 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 TRGV2A0A075B6R0 118 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 Q6ZRN7 208 aaPredicted RBP1.74□□□□□ -2.13
KDM3A-213ENST00000488971 SMIM4Q8WVI0 70 aa1.74□□□□□ -2.13
KDM3A-213ENST00000488971 ABCA4P78363 2273 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 A0A1B0GUT8 65 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 HCRTO43612 131 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 ACYP2P14621 99 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 ZNF137PP52743 207 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 CAV3P56539 151 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 Q6ZQY7 126 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 LINC00846Q9NV44 126 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 TET1Q8NFU7 2136 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 ZNF236Q9UL36 1845 aa1.73□□□□□ -2.13
KDM3A-213ENST00000488971 C4AP0C0L4 1744 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 C4BP0C0L5 1744 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 C3P01024 1663 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 CD163L1Q9NR16 1453 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 TRBV7-4A0A0J9YYF1 115 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 H0Y9P7 68 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 ATXN8Q156A1 80 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 Q96NJ1 140 aa1.72□□□□□ -2.13
KDM3A-213ENST00000488971 TIAM2Q8IVF5 1701 aa1.71□□□□□ -2.13
KDM3A-213ENST00000488971 SLIT1O75093 1534 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 PRRC2BQ5JSZ5 2229 aaKnown RBP1.71□□□□□ -2.14
KDM3A-213ENST00000488971 NHSQ6T4R5 1651 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 SNRPGP62308 76 aaKnown RBP1.71□□□□□ -2.14
KDM3A-213ENST00000488971 DEFB103AP81534 67 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 SPRR4Q96PI1 79 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 CCL19Q99731 98 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 NMES1Q9C002 83 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 ABRACLQ9P1F3 81 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 QSER1Q2KHR3 1735 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 DDX60Q8IY21 1712 aaKnown RBP1.71□□□□□ -2.14
KDM3A-213ENST00000488971 TRIOBPQ9H2D6 2365 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 ALS2Q96Q42 1657 aa1.71□□□□□ -2.14
KDM3A-213ENST00000488971 FAM208AQ9UK61 1670 aaKnown RBP1.71□□□□□ -2.14
KDM3A-213ENST00000488971 LRP6O75581 1613 aa1.7□□□□□ -2.14
KDM3A-213ENST00000488971 PRH1P02810 166 aa1.7□□□□□ -2.14
KDM3A-213ENST00000488971 S100A3P33764 101 aa1.7□□□□□ -2.14
KDM3A-213ENST00000488971 FAM103A1Q9BTL3 118 aaKnown RBP1.7□□□□□ -2.14
KDM3A-213ENST00000488971 PLAC8Q9NZF1 115 aa1.7□□□□□ -2.14
KDM3A-213ENST00000488971 ZFHX3Q15911 3703 aa1.7□□□□□ -2.14
KDM3A-213ENST00000488971 COL14A1Q05707 1796 aaKnown RBP1.7□□□□□ -2.14
KDM3A-213ENST00000488971 PCOTHQ58A44 107 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 NCBP2-AS2Q69YL0 99 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 OBSCN-AS1Q96MR7 158 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 UBR3Q6ZT12 1888 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 TJP1Q07157 1748 aa1.69□□□□□ -2.14
KDM3A-213ENST00000488971 NDUFB1O75438 58 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms