RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 Q6Q795 121 aa12.84□□□□□ -0.35
COL16A1-215ENST00000488897 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
COL16A1-215ENST00000488897 FAM240AA0A1B0GVK7 77 aa12.83□□□□□ -0.35
COL16A1-215ENST00000488897 SOSTDC1Q6X4U4 206 aa12.83□□□□□ -0.35
COL16A1-215ENST00000488897 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
COL16A1-215ENST00000488897 C15orf53Q8NAA6 179 aa12.82□□□□□ -0.36
COL16A1-215ENST00000488897 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
COL16A1-215ENST00000488897 TRGV2A0A075B6R0 118 aa12.81□□□□□ -0.36
COL16A1-215ENST00000488897 TRBV6-4A0A1B0GX49 114 aa12.81□□□□□ -0.36
COL16A1-215ENST00000488897 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
COL16A1-215ENST00000488897 GAGE7O76087 117 aa12.8□□□□□ -0.36
COL16A1-215ENST00000488897 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
COL16A1-215ENST00000488897 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
COL16A1-215ENST00000488897 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
COL16A1-215ENST00000488897 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
COL16A1-215ENST00000488897 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
COL16A1-215ENST00000488897 TRACP01848 142 aa12.78□□□□□ -0.36
COL16A1-215ENST00000488897 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
COL16A1-215ENST00000488897 TRGV4A0A0C4DH28 118 aa12.77□□□□□ -0.37
COL16A1-215ENST00000488897 APOC4P55056 127 aa12.77□□□□□ -0.37
COL16A1-215ENST00000488897 COX7B2Q8TF08 81 aa12.77□□□□□ -0.37
COL16A1-215ENST00000488897 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
COL16A1-215ENST00000488897 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
COL16A1-215ENST00000488897 ACYP1P07311 99 aa12.75□□□□□ -0.37
COL16A1-215ENST00000488897 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
COL16A1-215ENST00000488897 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
COL16A1-215ENST00000488897 X6R8D5 127 aa12.74□□□□□ -0.37
COL16A1-215ENST00000488897 GAGE6Q13070 117 aa12.74□□□□□ -0.37
COL16A1-215ENST00000488897 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
COL16A1-215ENST00000488897 KIR2DL5BQ8NHK3 375 aa12.72□□□□□ -0.37
COL16A1-215ENST00000488897 CRPP02741 224 aa12.71□□□□□ -0.37
COL16A1-215ENST00000488897 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
COL16A1-215ENST00000488897 FHL2Q14192 279 aa12.71□□□□□ -0.37
COL16A1-215ENST00000488897 B9D2Q9BPU9 175 aa12.71□□□□□ -0.37
COL16A1-215ENST00000488897 BAALC-AS2P0C853 105 aa12.71□□□□□ -0.38
COL16A1-215ENST00000488897 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.38
COL16A1-215ENST00000488897 TOMM7Q9P0U1 55 aa12.71□□□□□ -0.38
COL16A1-215ENST00000488897 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.38
COL16A1-215ENST00000488897 TM2D3Q9BRN9 247 aa12.7□□□□□ -0.38
COL16A1-215ENST00000488897 CHCHD5Q9BSY4 110 aa12.7□□□□□ -0.38
COL16A1-215ENST00000488897 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
COL16A1-215ENST00000488897 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
COL16A1-215ENST00000488897 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
COL16A1-215ENST00000488897 IGKV3OR2-268A0A0C4DH90 116 aa12.69□□□□□ -0.38
COL16A1-215ENST00000488897 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
COL16A1-215ENST00000488897 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
COL16A1-215ENST00000488897 TRBV7-7A0A0K0K1E9 115 aa12.68□□□□□ -0.38
COL16A1-215ENST00000488897 LINC00158P58513 81 aa12.68□□□□□ -0.38
COL16A1-215ENST00000488897 FAM218AQ96MZ4 157 aa12.68□□□□□ -0.38
COL16A1-215ENST00000488897 A0A087WZ39 114 aa12.67□□□□□ -0.38
COL16A1-215ENST00000488897 CELA1Q9UNI1 258 aa12.67□□□□□ -0.38
COL16A1-215ENST00000488897 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
COL16A1-215ENST00000488897 LINC00337Q8N6G1 96 aa12.66□□□□□ -0.38
COL16A1-215ENST00000488897 TENM2Q9NT68 2774 aa12.66□□□□□ -0.38
COL16A1-215ENST00000488897 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
COL16A1-215ENST00000488897 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
COL16A1-215ENST00000488897 Q8NAQ8 132 aa12.66□□□□□ -0.38
COL16A1-215ENST00000488897 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
COL16A1-215ENST00000488897 IMUPQ9GZP8 106 aa12.64□□□□□ -0.39
COL16A1-215ENST00000488897 CCL18P55774 89 aa12.63□□□□□ -0.39
COL16A1-215ENST00000488897 LYSTQ99698 3801 aa12.63□□□□□ -0.39
COL16A1-215ENST00000488897 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 MALP21145 153 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 B5MCH6 92 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 H0YGX0 51 aa12.62□□□□□ -0.39
COL16A1-215ENST00000488897 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
COL16A1-215ENST00000488897 SMIM11BQ8TCY0 68 aa12.61□□□□□ -0.39
COL16A1-215ENST00000488897 DNAL4O96015 105 aa12.6□□□□□ -0.39
COL16A1-215ENST00000488897 Q9HAA7 133 aa12.6□□□□□ -0.39
COL16A1-215ENST00000488897 CCDC179H3BU77 68 aa12.6□□□□□ -0.39
COL16A1-215ENST00000488897 LINC00612Q8N6U2 182 aa12.6□□□□□ -0.39
COL16A1-215ENST00000488897 PFN2P35080 140 aa12.59□□□□□ -0.39
COL16A1-215ENST00000488897 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
COL16A1-215ENST00000488897 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
COL16A1-215ENST00000488897 SDIM1Q6ZPB5 146 aa12.59□□□□□ -0.39
COL16A1-215ENST00000488897 A0A1B0GUV1 79 aa12.58□□□□□ -0.4
COL16A1-215ENST00000488897 GYPEP15421 78 aa12.58□□□□□ -0.4
COL16A1-215ENST00000488897 SS18Q15532 418 aa12.58□□□□□ -0.4
COL16A1-215ENST00000488897 PAX4O43316 350 aa12.57□□□□□ -0.4
COL16A1-215ENST00000488897 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
COL16A1-215ENST00000488897 SS18L2Q9UHA2 77 aa12.57□□□□□ -0.4
COL16A1-215ENST00000488897 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
COL16A1-215ENST00000488897 MIFP14174 115 aa12.56□□□□□ -0.4
COL16A1-215ENST00000488897 A0A087WYN8 130 aa12.56□□□□□ -0.4
COL16A1-215ENST00000488897 HTN3P15516 51 aa12.56□□□□□ -0.4
COL16A1-215ENST00000488897 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
COL16A1-215ENST00000488897 Q8IZM0 81 aa12.54□□□□□ -0.4
COL16A1-215ENST00000488897 XCL1P47992 114 aa12.54□□□□□ -0.4
COL16A1-215ENST00000488897 GAGE2AQ6NT46 116 aa12.54□□□□□ -0.4
COL16A1-215ENST00000488897 DNAH7Q8WXX0 4024 aa12.54□□□□□ -0.4
COL16A1-215ENST00000488897 SMIM9A6NGZ8 99 aa12.53□□□□□ -0.4
COL16A1-215ENST00000488897 Q6ZTC4 211 aa12.53□□□□□ -0.4
COL16A1-215ENST00000488897 OR13C6PQ8NH95 151 aa12.53□□□□□ -0.4
COL16A1-215ENST00000488897 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
COL16A1-215ENST00000488897 FAM236AA0A1B0GUQ0 79 aa12.51□□□□□ -0.41
COL16A1-215ENST00000488897 FAM236BA0A1B0GV22 79 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms