RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IGLV3-9A0A075B6K5 115 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 A0A087WVE0 104 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 A0A1B0GU33 70 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 H7C2G1 150 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 GNRH2O43555 120 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 PIGYQ3MUY2 71 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 ASB16-AS1Q495Z4 193 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 LYZL1Q6UWQ5 148 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 PATE2Q6UY27 113 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 CYP4F30PQ9H0H9 118 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 FAM215AQ9Y5M1 114 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 PKD1L2Q7Z442 2459 aa1.73□□□□□ -2.13
SSR1-209ENST00000488834 TNCP24821 2201 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 BPTFQ12830 3046 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 PDE4DIPQ5VU43 2346 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 TRAV23DV6A0A075B6W5 121 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 CRIP1P50238 77 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 Q86TA4 180 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 Q8N6K4 173 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 CCL4L1Q8NHW4 92 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 CLEC2BQ92478 149 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 TMEM141Q96I45 108 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 CNFNQ9BYD5 112 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 LINC00846Q9NV44 126 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
SSR1-209ENST00000488834 KIAA0100Q14667 2235 aaKnown RBP1.72□□□□□ -2.13
SSR1-209ENST00000488834 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 C10orf142B7Z368 130 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 HCG22E2RYF7 251 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 PSCAO43653 123 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 DNAL4O96015 105 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 SAA1P0DJI8 122 aaPredicted RBP1.71□□□□□ -2.14
SSR1-209ENST00000488834 SPANXN1Q5VSR9 72 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 FAM27BQ5VT28 67 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 C10orf113Q5VZT2 155 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 Q6ZS52 159 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 ZNF833PQ6ZTB9 187 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 HIGD2AQ9BW72 106 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 TMEM14BQ9NUH8 114 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 NDUFA12Q9UI09 145 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 SNURFQ9Y675 71 aa1.71□□□□□ -2.14
SSR1-209ENST00000488834 CADP27708 2225 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 IGHV1-18A0A0C4DH31 117 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 M0R1W7 72 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 M0R3E3 92 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 PPP1R17O96001 155 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 Q5VV11 94 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 Q6ZQT0 140 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 LIMD2Q9BT23 127 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 SMIM2Q9BVW6 85 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 F5P12259 2224 aa1.7□□□□□ -2.14
SSR1-209ENST00000488834 CR1P17927 2039 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 TRAV10A0A0B4J240 114 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 LOC101927531A0A1B0GV80 90 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 CLPSP04118 112 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 CTSGP08311 255 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 PDE6HQ13956 83 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 SPINK9Q5DT21 86 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 C10orf128Q5T292 105 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 ENHOQ6UWT2 76 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 TMEM254Q8TBM7 123 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 RETNLBQ9BQ08 111 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
SSR1-209ENST00000488834 IGHV3-64A0A075B6Q5 118 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 C5orf67F2Z3F1 127 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 H0YGX0 51 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 PRCDQ00LT1 54 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 NNATQ16517 81 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 C9orf116Q5BN46 136 aaPredicted RBP1.68□□□□□ -2.14
SSR1-209ENST00000488834 ZNF625Q96I27 306 aaPredicted RBP1.68□□□□□ -2.14
SSR1-209ENST00000488834 LINC00467Q9BRT7 94 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 UBL5Q9BZL1 73 aa1.68□□□□□ -2.14
SSR1-209ENST00000488834 IGLV10-54A0A075B6I4 117 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 LCE6AA0A183 80 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 B4DSR2 109 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 CHKB-CPT1BH3BT56 60 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 ELOF1P60002 83 aaKnown RBP1.67□□□□□ -2.14
SSR1-209ENST00000488834 NREPQ16612 68 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 SPTSSBQ8NFR3 76 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 C14orf132Q9NPU4 83 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 CDC42SE2Q9NRR3 84 aa1.67□□□□□ -2.14
SSR1-209ENST00000488834 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
SSR1-209ENST00000488834 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
SSR1-209ENST00000488834 PTPRQQ9UMZ3 2332 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 TRAV12-3A0A0B4J271 114 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 IGLV1-51P01701 117 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 STATHP02808 62 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 POLR2KP53803 58 aaKnown RBP1.66□□□□□ -2.14
SSR1-209ENST00000488834 ERHP84090 104 aaKnown RBP1.66□□□□□ -2.14
SSR1-209ENST00000488834 Q8N814 137 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 COX14Q96I36 57 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 CNTRLQ7Z7A1 2325 aa1.66□□□□□ -2.14
SSR1-209ENST00000488834 SORL1Q92673 2214 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms