RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 K7ERU9 68 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 APOMO95445 188 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 PRSS2P07478 247 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 MIAQ16674 131 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 LINC01556Q5JQF7 62 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 GTF2H5Q6ZYL4 71 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 Q8N3U1 123 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 C10orf126Q8N4M7 172 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 Q9H8V8 135 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 TOMM7Q9P0U1 55 aa4.79□□□□□ -1.64
SF3A3-206ENST00000487062 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 TRIAP1O43715 76 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 DNAH10OSP0CZ25 163 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 SMIM13P0DJ93 91 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 FXYD2P54710 66 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 RPL24P83731 157 aaKnown RBP4.78□□□□□ -1.64
SF3A3-206ENST00000487062 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 ENHOQ6UWT2 76 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 Q8IZM0 81 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
SF3A3-206ENST00000487062 NUPR2A6NF83 97 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 TAX1BP3O14907 124 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 IFITM1P13164 125 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 CXCL5P42830 114 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 FOXI1Q12951 378 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
SF3A3-206ENST00000487062 NHP2Q9NX24 153 aaKnown RBP4.77□□□□□ -1.65
SF3A3-206ENST00000487062 KLK5Q9Y337 293 aaPredicted RBP4.77□□□□□ -1.65
SF3A3-206ENST00000487062 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
SF3A3-206ENST00000487062 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.76□□□□□ -1.65
SF3A3-206ENST00000487062 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
SF3A3-206ENST00000487062 CKS1BP61024 79 aa4.76□□□□□ -1.65
SF3A3-206ENST00000487062 OCIAD2Q56VL3 154 aa4.76□□□□□ -1.65
SF3A3-206ENST00000487062 RMI2Q96E14 147 aa4.76□□□□□ -1.65
SF3A3-206ENST00000487062 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
SF3A3-206ENST00000487062 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
SF3A3-206ENST00000487062 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 RAB37Q96AX2 223 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 LITAFQ99732 161 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 APLNQ9ULZ1 77 aa4.75□□□□□ -1.65
SF3A3-206ENST00000487062 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 A4D1N5 150 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 LINC00158P58513 81 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 ADAMTSL4-AS1Q5T5F5 129 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 PPDPFQ9H3Y8 114 aa4.74□□□□□ -1.65
SF3A3-206ENST00000487062 A0A0U1RRA0 63 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 KIAA0087Q14695 138 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 ERG28Q9UKR5 140 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
SF3A3-206ENST00000487062 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 F8WDY8 70 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 H3BUT2 72 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 K7EP34 96 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 K7ERJ3 54 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 CFC1P0CG37 223 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 NPC2P61916 151 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 COX17Q14061 63 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 MUC7Q8TAX7 377 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 LINC00308Q8TCZ7 52 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 Q9HAA7 133 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
SF3A3-206ENST00000487062 PFN2P35080 140 aa4.71□□□□□ -1.66
SF3A3-206ENST00000487062 C2orf82Q6UX34 121 aa4.71□□□□□ -1.66
SF3A3-206ENST00000487062 MIR7-3HGQ8N6C7 128 aa4.71□□□□□ -1.66
SF3A3-206ENST00000487062 DAND5Q8N907 189 aa4.71□□□□□ -1.66
SF3A3-206ENST00000487062 A0A1W2PPM0 123 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 J3QR89 54 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 FABP2P12104 132 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 LYRM7Q5U5X0 104 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
SF3A3-206ENST00000487062 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
SF3A3-206ENST00000487062 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
SF3A3-206ENST00000487062 TRBV30A0A0K0K1B3 111 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 Q1RN00 199 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 TTC32Q5I0X7 151 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 SERTAD4-AS1Q5TG53 156 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 C6orf223Q8N319 242 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 C15orf56Q8N910 161 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 CAMK2N2Q96S95 79 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
SF3A3-206ENST00000487062 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
SF3A3-206ENST00000487062 TRAV13-2A0A0B4J235 113 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms