RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 S100A1P23297 94 aa-0.32□□□□□ -2.46
LTN1-206ENST00000486427 GNG4P50150 75 aa-0.32□□□□□ -2.46
LTN1-206ENST00000486427 DEFB105AQ8NG35 78 aa-0.32□□□□□ -2.46
LTN1-206ENST00000486427 PRO1854Q9UHT4 67 aa-0.32□□□□□ -2.46
LTN1-206ENST00000486427 ABCA3Q99758 1704 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 MARF1Q9Y4F3 1742 aaKnown RBP-0.33□□□□□ -2.46
LTN1-206ENST00000486427 ARHGAP5Q13017 1502 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 DNAJC13O75165 2243 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 DSTQ03001 7570 aaKnown RBP-0.33□□□□□ -2.46
LTN1-206ENST00000486427 IQSEC2Q5JU85 1478 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 NLRP1Q9C000 1473 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 A0A1B0GWA3 101 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 TRAPPC2P0DI81 140 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 TRAPPC2BP0DI82 140 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 SNCAP37840 140 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 C2orf88Q9BSF0 95 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 GNG8Q9UK08 70 aa-0.33□□□□□ -2.46
LTN1-206ENST00000486427 PAPPA2Q9BXP8 1791 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 CRYM-AS1A6NIL9 109 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 COX6CP09669 75 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 KRTAP19-7Q3SYF9 63 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 C12orf57Q99622 126 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 PRO1933Q9H354 126 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 FLGP20930 4061 aaPredicted RBP-0.34□□□□□ -2.46
LTN1-206ENST00000486427 ANKRD36A6QL64 1941 aa-0.34□□□□□ -2.46
LTN1-206ENST00000486427 PLEKHH2Q8IVE3 1493 aa-0.35□□□□□ -2.46
LTN1-206ENST00000486427 SETBP1Q9Y6X0 1596 aa-0.35□□□□□ -2.47
LTN1-206ENST00000486427 SPINK4O60575 86 aa-0.35□□□□□ -2.47
LTN1-206ENST00000486427 SAA2P0DJI9 122 aaPredicted RBP-0.35□□□□□ -2.47
LTN1-206ENST00000486427 CRIPTQ9P021 101 aa-0.35□□□□□ -2.47
LTN1-206ENST00000486427 MAPKBP1O60336 1514 aa-0.35□□□□□ -2.47
LTN1-206ENST00000486427 HERC1Q15751 4861 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 CNOT1A5YKK6 2376 aaKnown RBP-0.36□□□□□ -2.47
LTN1-206ENST00000486427 A0A087WVE0 104 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 hADV29S1A0JD25 119 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 SYS1-DBNDD2H3BUS1 97 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 SEC11AP67812 179 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 HSD52Q0P140 79 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 TMEM203Q969S6 136 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 APLNQ9ULZ1 77 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 KNDC1Q76NI1 1749 aa-0.36□□□□□ -2.47
LTN1-206ENST00000486427 ABCC5O15440 1437 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 CPSF4LA6NMK7 179 aaKnown RBP-0.37□□□□□ -2.47
LTN1-206ENST00000486427 H3BQ15 152 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 M0R2T5 61 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 COX8AP10176 69 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 ASIPP42127 132 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 SARNPP82979 210 aaKnown RBP-0.37□□□□□ -2.47
LTN1-206ENST00000486427 USMG5Q96IX5 58 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 LINC00846Q9NV44 126 aa-0.37□□□□□ -2.47
LTN1-206ENST00000486427 FAM135AQ9P2D6 1515 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 STAB2Q8WWQ8 2551 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 A0A1B0GU69 56 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 C7orf77A4D0Y5 90 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 TMEM262E9PQX1 116 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 GTF2H5Q6ZYL4 71 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 CCDC141Q6ZP82 1450 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 KIAA1551Q9HCM1 1747 aa-0.38□□□□□ -2.47
LTN1-206ENST00000486427 TARBP1Q13395 1621 aaKnown RBP-0.38□□□□□ -2.47
LTN1-206ENST00000486427 EDC4Q6P2E9 1401 aaKnown RBP-0.38□□□□□ -2.47
LTN1-206ENST00000486427 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 A0A0G2JND7 137 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 KRTDAPP60985 99 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 MRPS10P82664 201 aaKnown RBP-0.39□□□□□ -2.47
LTN1-206ENST00000486427 C6orf201Q7Z4U5 140 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 DEFB107AQ8IZN7 70 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 CGREF1Q99674 301 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 CACFD1Q9UGQ2 172 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 SLIT1O75093 1534 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 ZFYVE16Q7Z3T8 1539 aa-0.39□□□□□ -2.47
LTN1-206ENST00000486427 SHPRHQ149N8 1683 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 NKTRP30414 1462 aaKnown RBP-0.4□□□□□ -2.47
LTN1-206ENST00000486427 LRRC37AA6NMS7 1700 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 C20orf202A1L168 122 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 GNGT2O14610 69 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 H1FX-AS1Q4G0G2 97 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 PKD1P98161 4303 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 TGP01266 2768 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 PCLOQ9Y6V0 5065 aa-0.4□□□□□ -2.47
LTN1-206ENST00000486427 PCNX1Q96RV3 2341 aa-0.41□□□□□ -2.47
LTN1-206ENST00000486427 SETD2Q9BYW2 2564 aaPredicted RBP-0.41□□□□□ -2.47
LTN1-206ENST00000486427 MON2Q7Z3U7 1717 aa-0.41□□□□□ -2.47
LTN1-206ENST00000486427 CUX1P39880 1505 aa-0.41□□□□□ -2.48
LTN1-206ENST00000486427 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
LTN1-206ENST00000486427 COL14A1Q05707 1796 aaKnown RBP-0.42□□□□□ -2.48
LTN1-206ENST00000486427 TRBV25-1A0A075B6N4 114 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 H0Y9P7 68 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 H3BQF6 201 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 H7BZZ5 65 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 PSMG4Q5JS54 123 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 VAMP8Q9BV40 100 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 MLH3Q9UHC1 1453 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 REV3LO60673 3130 aa-0.42□□□□□ -2.48
LTN1-206ENST00000486427 C5P01031 1676 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 PRDM15P57071 1507 aaPredicted RBP-0.43□□□□□ -2.48
LTN1-206ENST00000486427 NCOA3Q9Y6Q9 1424 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 I3L3M4 83 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms