RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 LRP2P98164 4655 aa5.74□□□□□ -1.49
NUP50-215ENST00000484186 PRSS2P07478 247 aa5.74□□□□□ -1.49
NUP50-215ENST00000484186 G0S2P27469 103 aa5.74□□□□□ -1.49
NUP50-215ENST00000484186 KRTAP7-1Q8IUC3 87 aa5.74□□□□□ -1.49
NUP50-215ENST00000484186 DIRC1Q969H9 104 aa5.74□□□□□ -1.49
NUP50-215ENST00000484186 M0QXV9 152 aa5.73□□□□□ -1.49
NUP50-215ENST00000484186 SEC11AP67812 179 aa5.73□□□□□ -1.49
NUP50-215ENST00000484186 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
NUP50-215ENST00000484186 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
NUP50-215ENST00000484186 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
NUP50-215ENST00000484186 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
NUP50-215ENST00000484186 LINC01549A6NIU2 74 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 H0Y9J4 135 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 CKS1BP61024 79 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 HERVK_113P63121 156 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 UBE2BP63146 152 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 KIAA1644Q3SXP7 199 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 Q8IZM0 81 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 SLC7A5P1Q8MH63 180 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 TOMM6Q96B49 74 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 TIMM17AQ99595 171 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
NUP50-215ENST00000484186 SMCO4Q9NRQ5 59 aa5.72□□□□□ -1.49
NUP50-215ENST00000484186 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
NUP50-215ENST00000484186 MRPL18Q9H0U6 180 aaKnown RBP5.71□□□□□ -1.5
NUP50-215ENST00000484186 CDKN2A-AS1Q9UH64 79 aa5.71□□□□□ -1.5
NUP50-215ENST00000484186 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 ERASQ7Z444 233 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 YPEL4Q96NS1 127 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 GEMIN7Q9H840 131 aaKnown RBP5.7□□□□□ -1.5
NUP50-215ENST00000484186 TRAPPC1Q9Y5R8 145 aa5.7□□□□□ -1.5
NUP50-215ENST00000484186 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
NUP50-215ENST00000484186 F8VRH5 84 aa5.69□□□□□ -1.5
NUP50-215ENST00000484186 SCGB3A1Q96QR1 104 aa5.69□□□□□ -1.5
NUP50-215ENST00000484186 C22orf24Q9Y442 160 aa5.69□□□□□ -1.5
NUP50-215ENST00000484186 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
NUP50-215ENST00000484186 TINCRA0A1B0GVN0 87 aa5.68□□□□□ -1.5
NUP50-215ENST00000484186 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
NUP50-215ENST00000484186 CXCL5P42830 114 aa5.68□□□□□ -1.5
NUP50-215ENST00000484186 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
NUP50-215ENST00000484186 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
NUP50-215ENST00000484186 PDZD11Q5EBL8 140 aa5.67□□□□□ -1.5
NUP50-215ENST00000484186 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 NUPR1O60356 82 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 ZNF861PO60384 105 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 RAB5BP61020 215 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 CBLN2Q8IUK8 224 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
NUP50-215ENST00000484186 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
NUP50-215ENST00000484186 PMVKQ15126 192 aa5.65□□□□□ -1.5
NUP50-215ENST00000484186 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.5
NUP50-215ENST00000484186 C18orf32Q8TCD1 76 aa5.65□□□□□ -1.5
NUP50-215ENST00000484186 TP73-AS1Q9UF72 201 aa5.65□□□□□ -1.5
NUP50-215ENST00000484186 LINC00614P0C842 121 aa5.64□□□□□ -1.51
NUP50-215ENST00000484186 RPL13AP40429 203 aaKnown RBP5.64□□□□□ -1.51
NUP50-215ENST00000484186 SPINK8P0C7L1 97 aa5.63□□□□□ -1.51
NUP50-215ENST00000484186 LINC00167Q96N53 147 aa5.63□□□□□ -1.51
NUP50-215ENST00000484186 COLCA2A8K830 154 aa5.62□□□□□ -1.51
NUP50-215ENST00000484186 H3BRM9 83 aa5.62□□□□□ -1.51
NUP50-215ENST00000484186 BCE1O60756 84 aa5.62□□□□□ -1.51
NUP50-215ENST00000484186 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
NUP50-215ENST00000484186 CHCHD1Q96BP2 118 aaKnown RBP5.62□□□□□ -1.51
NUP50-215ENST00000484186 URB1-AS1Q96HZ7 61 aa5.62□□□□□ -1.51
NUP50-215ENST00000484186 LPAP08519 4548 aa5.62□□□□□ -1.51
NUP50-215ENST00000484186 IGLV5-37A0A075B6J1 123 aa5.61□□□□□ -1.51
NUP50-215ENST00000484186 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
NUP50-215ENST00000484186 HBDP02042 147 aa5.61□□□□□ -1.51
NUP50-215ENST00000484186 TRGC2P03986 189 aa5.61□□□□□ -1.51
NUP50-215ENST00000484186 A0A096LNJ9 63 aa5.6□□□□□ -1.51
NUP50-215ENST00000484186 GAGE10A6NGK3 116 aa5.6□□□□□ -1.51
NUP50-215ENST00000484186 ATP5LO75964 103 aa5.6□□□□□ -1.51
NUP50-215ENST00000484186 IGLC3P0DOY3 106 aa5.6□□□□□ -1.51
NUP50-215ENST00000484186 NDUFA6P56556 154 aa5.6□□□□□ -1.51
NUP50-215ENST00000484186 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
NUP50-215ENST00000484186 S100A1P23297 94 aa5.59□□□□□ -1.51
NUP50-215ENST00000484186 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
NUP50-215ENST00000484186 HSBP1O75506 76 aa5.58□□□□□ -1.52
NUP50-215ENST00000484186 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
NUP50-215ENST00000484186 PFN2P35080 140 aa5.58□□□□□ -1.52
NUP50-215ENST00000484186 PRR4Q16378 134 aa5.58□□□□□ -1.52
NUP50-215ENST00000484186 BAGE3Q86Y29 109 aa5.58□□□□□ -1.52
NUP50-215ENST00000484186 CRYGAP11844 174 aa5.57□□□□□ -1.52
NUP50-215ENST00000484186 UBE2AP49459 152 aa5.57□□□□□ -1.52
NUP50-215ENST00000484186 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
NUP50-215ENST00000484186 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 A0A087X002 238 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 SCO1O75880 301 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 TSPAN13O95857 204 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 COX17Q14061 63 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 KRTAP13-1Q8IUC0 172 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
NUP50-215ENST00000484186 C11orf86A6NJI1 115 aa5.55□□□□□ -1.52
NUP50-215ENST00000484186 VPREB1P12018 145 aa5.55□□□□□ -1.52
NUP50-215ENST00000484186 RPL24P83731 157 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms