RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MED13Q9UHV7 2174 aa1.04□□□□□ -2.24
ITGB1-213ENST00000484088 NRXN3Q9Y4C0 1643 aa1.04□□□□□ -2.24
ITGB1-213ENST00000484088 E9PCH4 1651 aa1.04□□□□□ -2.24
ITGB1-213ENST00000484088 C5P01031 1676 aa1.04□□□□□ -2.24
ITGB1-213ENST00000484088 DSCAMO60469 2012 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 TRPM6Q9BX84 2022 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 SEC16AO15027 2179 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 SVILO95425 2214 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 IGKV3-7A0A075B6H7 116 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 LOC110117498A0A087WWA1 95 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 ETDCA0A1B0GVM5 59 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 CLPSL1A2RUU4 121 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 CPSF4LA6NMK7 179 aaKnown RBP1.03□□□□□ -2.24
ITGB1-213ENST00000484088 C10orf142B7Z368 130 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 NDUFA4O00483 81 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 RNASE3P12724 160 aaKnown RBP1.03□□□□□ -2.24
ITGB1-213ENST00000484088 ZNF137PP52743 207 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 HCP5Q6MZN7 132 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 LINC00322Q6ZN03 302 aaPredicted RBP1.03□□□□□ -2.24
ITGB1-213ENST00000484088 PLAC8Q9NZF1 115 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 SCN7AQ01118 1682 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 COL4A6Q14031 1691 aa1.03□□□□□ -2.24
ITGB1-213ENST00000484088 COL14A1Q05707 1796 aaKnown RBP1.03□□□□□ -2.24
ITGB1-213ENST00000484088 COL5A1P20908 1838 aaPredicted RBP1.03□□□□□ -2.25
ITGB1-213ENST00000484088 ATAD5Q96QE3 1844 aa1.03□□□□□ -2.25
ITGB1-213ENST00000484088 PTPRDP23468 1912 aa1.03□□□□□ -2.25
ITGB1-213ENST00000484088 DLG5Q8TDM6 1919 aa1.03□□□□□ -2.25
ITGB1-213ENST00000484088 PCNX2A6NKB5 2137 aa1.03□□□□□ -2.25
ITGB1-213ENST00000484088 IGKV2-40A0A087WW87 121 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-213ENST00000484088 TRBV6-4A0A1B0GX49 114 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 IGKV2D-40P01614 121 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-213ENST00000484088 FXYD4P59646 89 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 MYO7BQ6PIF6 2116 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 NINQ8N4C6 2090 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 SHROOM3Q8TF72 1996 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 ZCCHC13Q8WW36 166 aaKnown RBP1.02□□□□□ -2.25
ITGB1-213ENST00000484088 PATE1Q8WXA2 126 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 ARHGAP5-AS1Q96IT6 56 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 WDR90Q96KV7 1748 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 SPRR4Q96PI1 79 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 MUC4Q99102 2169 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 SMIM2Q9BVW6 85 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 TTTY12Q9BZ98 90 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 SCN3AQ9NY46 2000 aa1.02□□□□□ -2.25
ITGB1-213ENST00000484088 SPAG17Q6Q759 2223 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 FREM3P0C091 2139 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 HEATR1Q9H583 2144 aaKnown RBP1.01□□□□□ -2.25
ITGB1-213ENST00000484088 PLXNA3P51805 1871 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 ARFGEF1Q9Y6D6 1849 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 PAPPA2Q9BXP8 1791 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 RICTORQ6R327 1708 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 DDX60Q8IY21 1712 aaKnown RBP1.01□□□□□ -2.25
ITGB1-213ENST00000484088 LMO7Q8WWI1 1683 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 TRGV2A0A075B6R0 118 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 A0A1B0GU69 56 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 NCR3O14931 201 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 IAPPP10997 89 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 COA5Q86WW8 74 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 CNFNQ9BYD5 112 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 KCNQ1DNQ9H478 68 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 PRO2289Q9P1D8 64 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 CUL9Q8IWT3 2517 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 MYO7AQ13402 2215 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 ANKRD36A6QL64 1941 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 LTBP2Q14767 1821 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 KIAA1549LQ6ZVL6 1849 aa1.01□□□□□ -2.25
ITGB1-213ENST00000484088 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.01□□□□□ -2.25
ITGB1-213ENST00000484088 KIAA0100Q14667 2235 aaKnown RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 PLXNB1O43157 2135 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 LCTP09848 1927 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 GREB1Q4ZG55 1949 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 TRGV1A0A0A0MS02 117 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 IGKV3OR2-268A0A0C4DH90 116 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 COX7BP24311 80 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 SPINK7P58062 85 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 TFF3Q07654 80 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 BRD3OSQ6XYD6 125 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 RPS27LQ71UM5 84 aaKnown RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 DEFB132Q7Z7B7 95 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 C9orf163Q8N9P6 203 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 ZNF625Q96I27 306 aaPredicted RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 PLXNA2O75051 1894 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 UBR3Q6ZT12 1888 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 COL11A1P12107 1806 aaPredicted RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 SIP14410 1827 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 ZNF236Q9UL36 1845 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 LY75O60449 1722 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 DIDO1Q9BTC0 2240 aaKnown RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 INTS1Q8N201 2190 aaKnown RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 BAZ2BQ9UIF8 2168 aaKnown RBP1□□□□□ -2.25
ITGB1-213ENST00000484088 SPTBP11277 2137 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 HEATR5BQ9P2D3 2071 aa1□□□□□ -2.25
ITGB1-213ENST00000484088 ZNF407Q9C0G0 2248 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 TOGARAM1Q9Y4F4 1720 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 DEFB131BA0A096LNP1 70 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 LOC730098B7Z3J9 87 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 NDUFA1O15239 70 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 IGLV3-1P01715 115 aa0.99□□□□□ -2.25
ITGB1-213ENST00000484088 ACYP2P14621 99 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms