RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TOMM6Q96B49 74 aa10.73□□□□□ -0.69
ATG4B-221ENST00000483778 K7EMI3 77 aa10.72□□□□□ -0.69
ATG4B-221ENST00000483778 ZNF861PO60384 105 aa10.72□□□□□ -0.69
ATG4B-221ENST00000483778 HERVK_113P63121 156 aa10.71□□□□□ -0.69
ATG4B-221ENST00000483778 GEMIN7Q9H840 131 aaKnown RBP10.71□□□□□ -0.69
ATG4B-221ENST00000483778 F8VRH5 84 aa10.7□□□□□ -0.7
ATG4B-221ENST00000483778 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
ATG4B-221ENST00000483778 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
ATG4B-221ENST00000483778 RAB14P61106 215 aa10.69□□□□□ -0.7
ATG4B-221ENST00000483778 ERASQ7Z444 233 aa10.69□□□□□ -0.7
ATG4B-221ENST00000483778 SCGB3A1Q96QR1 104 aa10.69□□□□□ -0.7
ATG4B-221ENST00000483778 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
ATG4B-221ENST00000483778 SEC11AP67812 179 aa10.67□□□□□ -0.7
ATG4B-221ENST00000483778 PRR4Q16378 134 aa10.67□□□□□ -0.7
ATG4B-221ENST00000483778 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
ATG4B-221ENST00000483778 A0A087X002 238 aa10.66□□□□□ -0.7
ATG4B-221ENST00000483778 LBHQ53QV2 105 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-221ENST00000483778 MRPL55Q7Z7F7 128 aaKnown RBP10.66□□□□□ -0.7
ATG4B-221ENST00000483778 LINC00167Q96N53 147 aa10.66□□□□□ -0.7
ATG4B-221ENST00000483778 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
ATG4B-221ENST00000483778 TINCRA0A1B0GVN0 87 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 NUPR1O60356 82 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 TSPAN13O95857 204 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 RPL13AP40429 203 aaKnown RBP10.65□□□□□ -0.7
ATG4B-221ENST00000483778 CLLU1Q5K131 121 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 COX7B2Q8TF08 81 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 CST9LQ9H4G1 147 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 ANAPC11Q9NYG5 84 aa10.65□□□□□ -0.7
ATG4B-221ENST00000483778 IGLV5-45A0A087WSX0 123 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 LINC01546A6NGU7 62 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 G0S2P27469 103 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 RAB5BP61020 215 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 PDZD11Q5EBL8 140 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
ATG4B-221ENST00000483778 TMEM218A2RU14 115 aa10.63□□□□□ -0.71
ATG4B-221ENST00000483778 BCE1O60756 84 aa10.63□□□□□ -0.71
ATG4B-221ENST00000483778 SCO1O75880 301 aa10.62□□□□□ -0.71
ATG4B-221ENST00000483778 IFITM2Q01629 132 aa10.62□□□□□ -0.71
ATG4B-221ENST00000483778 CXCL5P42830 114 aa10.61□□□□□ -0.71
ATG4B-221ENST00000483778 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
ATG4B-221ENST00000483778 TRAV9-1A0A075B6T8 112 aa10.59□□□□□ -0.71
ATG4B-221ENST00000483778 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
ATG4B-221ENST00000483778 PMVKQ15126 192 aa10.58□□□□□ -0.72
ATG4B-221ENST00000483778 KRTAP13-1Q8IUC0 172 aa10.58□□□□□ -0.72
ATG4B-221ENST00000483778 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
ATG4B-221ENST00000483778 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
ATG4B-221ENST00000483778 A0A096LNJ9 63 aa10.56□□□□□ -0.72
ATG4B-221ENST00000483778 UQCC3Q6UW78 93 aa10.56□□□□□ -0.72
ATG4B-221ENST00000483778 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
ATG4B-221ENST00000483778 MRPL18Q9H0U6 180 aaKnown RBP10.56□□□□□ -0.72
ATG4B-221ENST00000483778 FABP9Q0Z7S8 132 aa10.55□□□□□ -0.72
ATG4B-221ENST00000483778 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
ATG4B-221ENST00000483778 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
ATG4B-221ENST00000483778 CRYGAP11844 174 aa10.54□□□□□ -0.72
ATG4B-221ENST00000483778 PFN2P35080 140 aa10.54□□□□□ -0.72
ATG4B-221ENST00000483778 SEC11CQ9BY50 192 aa10.54□□□□□ -0.72
ATG4B-221ENST00000483778 MUC2Q02817 5179 aa10.54□□□□□ -0.72
ATG4B-221ENST00000483778 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
ATG4B-221ENST00000483778 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
ATG4B-221ENST00000483778 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
ATG4B-221ENST00000483778 S100PP25815 95 aa10.53□□□□□ -0.72
ATG4B-221ENST00000483778 Q8NDZ9 215 aa10.53□□□□□ -0.72
ATG4B-221ENST00000483778 IGLC3P0DOY3 106 aa10.52□□□□□ -0.73
ATG4B-221ENST00000483778 NDUFA6P56556 154 aa10.52□□□□□ -0.73
ATG4B-221ENST00000483778 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
ATG4B-221ENST00000483778 LINC01549A6NIU2 74 aa10.51□□□□□ -0.73
ATG4B-221ENST00000483778 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
ATG4B-221ENST00000483778 UBE2AP49459 152 aa10.51□□□□□ -0.73
ATG4B-221ENST00000483778 SMCO4Q9NRQ5 59 aa10.51□□□□□ -0.73
ATG4B-221ENST00000483778 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
ATG4B-221ENST00000483778 ATP5LO75964 103 aa10.5□□□□□ -0.73
ATG4B-221ENST00000483778 VPREB1P12018 145 aa10.5□□□□□ -0.73
ATG4B-221ENST00000483778 PMCHL1Q16048 86 aa10.5□□□□□ -0.73
ATG4B-221ENST00000483778 ZNF625Q96I27 306 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-221ENST00000483778 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
ATG4B-221ENST00000483778 H3BRM9 83 aa10.49□□□□□ -0.73
ATG4B-221ENST00000483778 C10orf91Q5T1B1 145 aa10.49□□□□□ -0.73
ATG4B-221ENST00000483778 COMMD7Q86VX2 200 aa10.49□□□□□ -0.73
ATG4B-221ENST00000483778 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
ATG4B-221ENST00000483778 PRLHP81277 87 aa10.48□□□□□ -0.73
ATG4B-221ENST00000483778 RPS10P5Q9NQ39 176 aa10.48□□□□□ -0.73
ATG4B-221ENST00000483778 COX19Q49B96 90 aa10.47□□□□□ -0.73
ATG4B-221ENST00000483778 C18orf32Q8TCD1 76 aa10.47□□□□□ -0.73
ATG4B-221ENST00000483778 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
ATG4B-221ENST00000483778 C11orf86A6NJI1 115 aa10.46□□□□□ -0.73
ATG4B-221ENST00000483778 LINC00614P0C842 121 aa10.46□□□□□ -0.73
ATG4B-221ENST00000483778 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
ATG4B-221ENST00000483778 M0R378 163 aa10.44□□□□□ -0.74
ATG4B-221ENST00000483778 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
ATG4B-221ENST00000483778 FAM19A1Q7Z5A9 133 aa10.44□□□□□ -0.74
ATG4B-221ENST00000483778 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
ATG4B-221ENST00000483778 TRAPPC1Q9Y5R8 145 aa10.43□□□□□ -0.74
ATG4B-221ENST00000483778 HBDP02042 147 aa10.42□□□□□ -0.74
ATG4B-221ENST00000483778 RHEBQ15382 184 aa10.42□□□□□ -0.74
ATG4B-221ENST00000483778 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
ATG4B-221ENST00000483778 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
ATG4B-221ENST00000483778 PLEKHB2Q96CS7 222 aa10.41□□□□□ -0.74
ATG4B-221ENST00000483778 COX17Q14061 63 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms