RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 F5H768 121 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 ATOX1O00244 68 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 OVOL2Q9BRP0 275 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
VPS52-218ENST00000482399 APCP25054 2843 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 A8MTW9 85 aa8.97□□□□□ -0.97
VPS52-218ENST00000482399 RPL28P46779 137 aaKnown RBP8.97□□□□□ -0.97
VPS52-218ENST00000482399 C16orf74Q96GX8 76 aa8.97□□□□□ -0.97
VPS52-218ENST00000482399 IMUPQ9GZP8 106 aa8.97□□□□□ -0.97
VPS52-218ENST00000482399 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
VPS52-218ENST00000482399 COX7CP15954 63 aa8.96□□□□□ -0.97
VPS52-218ENST00000482399 HILS1P60008 231 aa8.96□□□□□ -0.97
VPS52-218ENST00000482399 USP24Q9UPU5 2620 aa8.96□□□□□ -0.98
VPS52-218ENST00000482399 HECTD1Q9ULT8 2610 aa8.96□□□□□ -0.98
VPS52-218ENST00000482399 DNAJC9-AS1A6NH13 148 aa8.96□□□□□ -0.98
VPS52-218ENST00000482399 DSCR8Q96T75 97 aa8.96□□□□□ -0.98
VPS52-218ENST00000482399 ENHOQ6UWT2 76 aa8.95□□□□□ -0.98
VPS52-218ENST00000482399 ATRQ13535 2644 aa8.95□□□□□ -0.98
VPS52-218ENST00000482399 USP17L23D6RBM5 183 aa8.95□□□□□ -0.98
VPS52-218ENST00000482399 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
VPS52-218ENST00000482399 DEFB113Q30KQ7 82 aa8.93□□□□□ -0.98
VPS52-218ENST00000482399 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
VPS52-218ENST00000482399 DEFB121Q5J5C9 76 aa8.93□□□□□ -0.98
VPS52-218ENST00000482399 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
VPS52-218ENST00000482399 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
VPS52-218ENST00000482399 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
VPS52-218ENST00000482399 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
VPS52-218ENST00000482399 UNC79Q9P2D8 2635 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 GHRHP01286 108 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 BBC3Q96PG8 261 aaPredicted RBP8.92□□□□□ -0.98
VPS52-218ENST00000482399 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 J3KT08 172 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 C20orf197Q8N268 126 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 Q8N3U1 123 aa8.92□□□□□ -0.98
VPS52-218ENST00000482399 LINC00482Q8N8I6 264 aa8.91□□□□□ -0.98
VPS52-218ENST00000482399 KIR2DL5BQ8NHK3 375 aa8.91□□□□□ -0.98
VPS52-218ENST00000482399 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
VPS52-218ENST00000482399 TRBV6-4A0A1B0GX49 114 aa8.91□□□□□ -0.98
VPS52-218ENST00000482399 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
VPS52-218ENST00000482399 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
VPS52-218ENST00000482399 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
VPS52-218ENST00000482399 FAM19A5Q7Z5A7 132 aaPredicted RBP8.89□□□□□ -0.99
VPS52-218ENST00000482399 A0A087WZ39 114 aa8.89□□□□□ -0.99
VPS52-218ENST00000482399 FHL2Q14192 279 aa8.89□□□□□ -0.99
VPS52-218ENST00000482399 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
VPS52-218ENST00000482399 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
VPS52-218ENST00000482399 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
VPS52-218ENST00000482399 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
VPS52-218ENST00000482399 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
VPS52-218ENST00000482399 LINC01006Q8NI28 216 aa8.86□□□□□ -0.99
VPS52-218ENST00000482399 UPK3BQ9BT76 320 aa8.86□□□□□ -0.99
VPS52-218ENST00000482399 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
VPS52-218ENST00000482399 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
VPS52-218ENST00000482399 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
VPS52-218ENST00000482399 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
VPS52-218ENST00000482399 DAD1P61803 113 aa8.85□□□□□ -0.99
VPS52-218ENST00000482399 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
VPS52-218ENST00000482399 TEP1Q99973 2627 aaKnown RBP8.85□□□□□ -0.99
VPS52-218ENST00000482399 RBM3P98179 157 aaKnown RBP8.84□□□□□ -0.99
VPS52-218ENST00000482399 LINC01600Q96MT4 127 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 CR1P17927 2039 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 JMJD7-PLA2G4BH0Y9G9 81 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 GIG44P09565 113 aaPredicted RBP8.84□□□□□ -0.99
VPS52-218ENST00000482399 REG3AQ06141 175 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 SPAG11BQ08648 103 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 Q6JHZ5 121 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 UNQ6190/PRO20217Q6UXQ8 127 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 PRO0255Q9UI72 69 aa8.84□□□□□ -0.99
VPS52-218ENST00000482399 C5orf47Q569G3 176 aa8.83□□□□□ -1
VPS52-218ENST00000482399 Q8N814 137 aa8.83□□□□□ -1
VPS52-218ENST00000482399 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
VPS52-218ENST00000482399 CMC4P56277 68 aaPredicted RBP8.83□□□□□ -1
VPS52-218ENST00000482399 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
VPS52-218ENST00000482399 SNURFQ9Y675 71 aa8.83□□□□□ -1
VPS52-218ENST00000482399 A0A096LNT2 108 aa8.83□□□□□ -1
VPS52-218ENST00000482399 Q6ZQY7 126 aa8.83□□□□□ -1
VPS52-218ENST00000482399 HELZ2Q9BYK8 2649 aaKnown RBP8.83□□□□□ -1
VPS52-218ENST00000482399 CCKP06307 115 aa8.82□□□□□ -1
VPS52-218ENST00000482399 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
VPS52-218ENST00000482399 PLAC8L1A1L4L8 177 aa8.8□□□□□ -1
VPS52-218ENST00000482399 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
VPS52-218ENST00000482399 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
VPS52-218ENST00000482399 Q8IZM0 81 aa8.79□□□□□ -1
VPS52-218ENST00000482399 C10orf25Q5T742 122 aa8.79□□□□□ -1
VPS52-218ENST00000482399 FSHBP01225 129 aa8.78□□□□□ -1
VPS52-218ENST00000482399 CRYGAP11844 174 aa8.78□□□□□ -1
VPS52-218ENST00000482399 SMR3AQ99954 134 aa8.78□□□□□ -1
VPS52-218ENST00000482399 IGLV1-51P01701 117 aa8.78□□□□□ -1
VPS52-218ENST00000482399 ZNF843Q8N446 348 aa8.78□□□□□ -1
VPS52-218ENST00000482399 C2orf48Q96LS8 159 aa8.77□□□□□ -1
VPS52-218ENST00000482399 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
VPS52-218ENST00000482399 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
VPS52-218ENST00000482399 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
VPS52-218ENST00000482399 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
VPS52-218ENST00000482399 IGHV4-28A0A0C4DH34 117 aa8.76□□□□□ -1.01
VPS52-218ENST00000482399 CYSRT1A8MQ03 144 aa8.76□□□□□ -1.01
VPS52-218ENST00000482399 TMEM258P61165 79 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms