RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 A0A087WXM4 84 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 LOC107986453A0A1B0GWG9 222 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 MGST1P10620 155 aaKnown RBP1.8□□□□□ -2.12
SMC6-208ENST00000481708 GUCA1AP43080 201 aaPredicted RBP1.8□□□□□ -2.12
SMC6-208ENST00000481708 FXYD2P54710 66 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 PYY3Q5JQD4 70 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 CMC2Q9NRP2 79 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 TMSB15BA0A087X1C1 80 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 MT-ATP8P03928 68 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 PABPC1L2AQ5JQF8 200 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 SORL1Q92673 2214 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.8□□□□□ -2.12
SMC6-208ENST00000481708 LOC107984156A0A0G2JMH3 177 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 H3BNG1 76 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 ARL17AQ8IVW1 177 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 TPRKBQ9Y3C4 175 aa1.8□□□□□ -2.12
SMC6-208ENST00000481708 SDCBPO00560 298 aaPredicted RBP1.79□□□□□ -2.12
SMC6-208ENST00000481708 CYB5AP00167 134 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 ETV6P41212 452 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 ZNF826PQ6ZT77 177 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 OR8B3Q8NGG8 313 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 RERGLQ9H628 205 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 CPSF4LA6NMK7 179 aaKnown RBP1.79□□□□□ -2.12
SMC6-208ENST00000481708 GNGT2O14610 69 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 TPPP2P59282 170 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 ZNF846Q147U1 533 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 OR5AK2Q8NH90 309 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 CYSTM1Q9H1C7 97 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 RPRMQ9NS64 109 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 LPAP08519 4548 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 A0A0D9SG52 128 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 IL4P05112 153 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 DPPA3Q6W0C5 159 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 LINC00526Q96FQ7 95 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 PRO1933Q9H354 126 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 NDUFB11Q9NX14 153 aa1.79□□□□□ -2.12
SMC6-208ENST00000481708 TNCP24821 2201 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 INSL4Q14641 139 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 LYPD1Q8N2G4 141 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 CST11Q9H112 138 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 MUC2Q02817 5179 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 A0A0G2JQZ4 141 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 MRPS36P82909 103 aaKnown RBP1.78□□□□□ -2.12
SMC6-208ENST00000481708 MRPL54Q6P161 138 aaKnown RBP1.78□□□□□ -2.12
SMC6-208ENST00000481708 RAB37Q96AX2 223 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 LINC00474Q9P2X8 69 aa1.78□□□□□ -2.12
SMC6-208ENST00000481708 MUC21A0A140T8X8 626 aa1.78□□□□□ -2.13
SMC6-208ENST00000481708 LYNX1G3V0Z9 82 aa1.78□□□□□ -2.13
SMC6-208ENST00000481708 LYNX1P0DP58 116 aa1.78□□□□□ -2.13
SMC6-208ENST00000481708 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.13
SMC6-208ENST00000481708 TRAV1-2A0A0B4J238 106 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 NUPR2A6NF83 97 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 ZNF705FA8MVS1 300 aaPredicted RBP1.77□□□□□ -2.13
SMC6-208ENST00000481708 MCRIP1C9JLW8 97 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 IFITM1P13164 125 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 KRTAP13-2Q52LG2 175 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 TTC9CQ8N5M4 171 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 RBAKDNA6NC62 111 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 LY6G6CO95867 125 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 PMP2P02689 132 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 HMGN3Q15651 99 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 SCRT1Q9BWW7 348 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 TPT1P13693 172 aaKnown RBP1.77□□□□□ -2.13
SMC6-208ENST00000481708 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 COL5A1-AS1Q5SY13 56 aa1.77□□□□□ -2.13
SMC6-208ENST00000481708 TRAV40A0A0B4J280 105 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 C9orf153Q5TBE3 101 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 LINC01545Q5VT33 79 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 ATP11AUNQ6ZP68 121 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 GTF2H5Q6ZYL4 71 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 HMGN2P46Q86SG4 172 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 KCNRGQ8N5I3 272 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 DPH3P1Q9H4G8 78 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 TAS2R4Q9NYW5 299 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 ZNF563Q8TA94 476 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 SERP1Q9Y6X1 66 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 Q56UQ5 140 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 Q8N8P6 123 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 Q96M85 177 aa1.76□□□□□ -2.13
SMC6-208ENST00000481708 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 CKS2P33552 79 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 IGHV3-64A0A075B6Q5 118 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 IGHV1-24A0A0C4DH33 117 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 BRD3OSQ6XYD6 125 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 S100ZQ8WXG8 99 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 SMAD5-AS1Q9Y6J3 95 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 R4GMQ9 66 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 C2orf70A6NJV1 201 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 OR4X2Q8NGF9 303 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 OR2T35Q8NGX2 323 aa1.75□□□□□ -2.13
SMC6-208ENST00000481708 PNMA8CA0A1B0GUJ8 204 aa1.74□□□□□ -2.13
SMC6-208ENST00000481708 MIFP14174 115 aa1.74□□□□□ -2.13
SMC6-208ENST00000481708 NFYAP23511 347 aaPredicted RBP1.74□□□□□ -2.13
SMC6-208ENST00000481708 ANAPC11Q9NYG5 84 aa1.74□□□□□ -2.13
SMC6-208ENST00000481708 V9GYH0 126 aa1.74□□□□□ -2.13
SMC6-208ENST00000481708 RBM3P98179 157 aaKnown RBP1.74□□□□□ -2.13
SMC6-208ENST00000481708 Q8N9L7 120 aa1.74□□□□□ -2.13
SMC6-208ENST00000481708 AMELYQ99218 206 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms