RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-208	ENST00000480994	HMCN2	Q8NDA2	5059 aa		10.46	□□□□□ -0.73
NECAB3-208	ENST00000480994	PRSS2	P07478	247 aa		10.46	□□□□□ -0.73
NECAB3-208	ENST00000480994	MT1HL1	P0DM35	61 aa		10.46	□□□□□ -0.73
NECAB3-208	ENST00000480994	SPINK6	Q6UWN8	80 aa		10.46	□□□□□ -0.73
NECAB3-208	ENST00000480994		A0A096LNJ9	63 aa		10.45	□□□□□ -0.74
NECAB3-208	ENST00000480994	URB1-AS1	Q96HZ7	61 aa		10.45	□□□□□ -0.74
NECAB3-208	ENST00000480994	YPEL4	Q96NS1	127 aa		10.45	□□□□□ -0.74
NECAB3-208	ENST00000480994	CST9L	Q9H4G1	147 aa		10.45	□□□□□ -0.74
NECAB3-208	ENST00000480994	SMIM1	B2RUZ4	78 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	CXCL5	P42830	114 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	CKS1B	P61024	79 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	7e-7	■■■■□ 19.4
NECAB3-208	ENST00000480994	PMVK	Q15126	192 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	SERTAD4-AS1	Q5TG53	156 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	LINC00469	Q8N7U9	141 aa		10.44	□□□□□ -0.74
NECAB3-208	ENST00000480994	LINC00614	P0C842	121 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	ODF1	Q14990	250 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	PDZD11	Q5EBL8	140 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	C6orf226	Q5I0X4	101 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	PHF5A	Q7RTV0	110 aa	Known RBP	10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	TOMM7	Q9P0U1	55 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	PSORS1C2	Q9UIG4	136 aa		10.43	□□□□□ -0.74
NECAB3-208	ENST00000480994	FAM168B	A1KXE4	195 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994		F8VRH5	84 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994	HBD	P02042	147 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994	GAGE2E	Q4V326	116 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994	KRTAP7-1	Q8IUC3	87 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994	GAGE2D	Q9UEU5	116 aa		10.42	□□□□□ -0.74
NECAB3-208	ENST00000480994	C9orf129	Q5T035	196 aa	Known RBP	10.41	□□□□□ -0.74
NECAB3-208	ENST00000480994	LINC01600	Q96MT4	127 aa		10.41	□□□□□ -0.74
NECAB3-208	ENST00000480994	IGLC3	P0DOY3	106 aa		10.4	□□□□□ -0.74
NECAB3-208	ENST00000480994	RAB5B	P61020	215 aa		10.4	□□□□□ -0.74
NECAB3-208	ENST00000480994	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.39	□□□□□ -0.75
NECAB3-208	ENST00000480994		M0QXV9	152 aa		10.38	□□□□□ -0.75
NECAB3-208	ENST00000480994	REG3G	Q6UW15	175 aa		10.38	□□□□□ -0.75
NECAB3-208	ENST00000480994	COX7B2	Q8TF08	81 aa		10.38	□□□□□ -0.75
NECAB3-208	ENST00000480994		H3BRM9	83 aa		10.37	□□□□□ -0.75
NECAB3-208	ENST00000480994	ATP5L	O75964	103 aa		10.36	□□□□□ -0.75
NECAB3-208	ENST00000480994	IGLV5-39	A0A0G2JS06	123 aa		10.35	□□□□□ -0.75
NECAB3-208	ENST00000480994	SPINK8	P0C7L1	97 aa		10.35	□□□□□ -0.75
NECAB3-208	ENST00000480994	C1orf137	Q5JT78	98 aa		10.35	□□□□□ -0.75
NECAB3-208	ENST00000480994	KRTAP11-1	Q8IUC1	163 aa		10.35	□□□□□ -0.75
NECAB3-208	ENST00000480994	CHCHD1	Q96BP2	118 aa	Known RBP	10.35	□□□□□ -0.75
NECAB3-208	ENST00000480994	PMCHL1	Q16048	86 aa		10.34	□□□□□ -0.75
NECAB3-208	ENST00000480994	IGLV7-43	P04211	117 aa		10.33	□□□□□ -0.76
NECAB3-208	ENST00000480994	ZNF22	P17026	224 aa	Predicted RBP	10.33	□□□□□ -0.76
NECAB3-208	ENST00000480994	CBLN2	Q8IUK8	224 aa		10.33	□□□□□ -0.76
NECAB3-208	ENST00000480994	TP73-AS1	Q9UF72	201 aa		10.33	□□□□□ -0.76
NECAB3-208	ENST00000480994	KRTAP10-8	P60410	259 aa		10.31	□□□□□ -0.76
NECAB3-208	ENST00000480994	XAGE1A	Q9HD64	81 aa		10.31	□□□□□ -0.76
NECAB3-208	ENST00000480994	NDUFA6	P56556	154 aa		10.3	□□□□□ -0.76
NECAB3-208	ENST00000480994	UBE2B	P63146	152 aa		10.3	□□□□□ -0.76
NECAB3-208	ENST00000480994	PLA2G2D	Q9UNK4	145 aa		10.3	□□□□□ -0.76
NECAB3-208	ENST00000480994	C11orf86	A6NJI1	115 aa		10.29	□□□□□ -0.76
NECAB3-208	ENST00000480994	BAGE3	Q86Y29	109 aa		10.29	□□□□□ -0.76
NECAB3-208	ENST00000480994	DIRC1	Q969H9	104 aa		10.29	□□□□□ -0.76
NECAB3-208	ENST00000480994	C22orf24	Q9Y442	160 aa		10.29	□□□□□ -0.76
NECAB3-208	ENST00000480994	TRAV12-1	A0A0B4J245	112 aa		10.28	□□□□□ -0.76
NECAB3-208	ENST00000480994	LBH	Q53QV2	105 aa	Predicted RBP	10.28	□□□□□ -0.76
NECAB3-208	ENST00000480994		H0Y9J4	135 aa		10.27	□□□□□ -0.77
NECAB3-208	ENST00000480994	NUPR1	O60356	82 aa		10.27	□□□□□ -0.77
NECAB3-208	ENST00000480994	SFTA2	Q6UW10	78 aa		10.27	□□□□□ -0.77
NECAB3-208	ENST00000480994	IGLV5-37	A0A075B6J1	123 aa		10.26	□□□□□ -0.77
NECAB3-208	ENST00000480994	SLC7A5P1	Q8MH63	180 aa		10.26	□□□□□ -0.77
NECAB3-208	ENST00000480994	IFI27L1	Q96BM0	104 aa		10.26	□□□□□ -0.77
NECAB3-208	ENST00000480994	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.26	□□□□□ -0.77
NECAB3-208	ENST00000480994	MRPL55	Q7Z7F7	128 aa	Known RBP	10.25	□□□□□ -0.77
NECAB3-208	ENST00000480994	HSBP1	O75506	76 aa		10.24	□□□□□ -0.77
NECAB3-208	ENST00000480994	TRGC2	P03986	189 aa		10.24	□□□□□ -0.77
NECAB3-208	ENST00000480994	COX17	Q14061	63 aa		10.24	□□□□□ -0.77
NECAB3-208	ENST00000480994	TMEM170B	Q5T4T1	132 aa		10.24	□□□□□ -0.77
NECAB3-208	ENST00000480994	ZNF625	Q96I27	306 aa	Predicted RBP	10.23	□□□□□ -0.77
NECAB3-208	ENST00000480994	ERG28	Q9UKR5	140 aa		10.22	□□□□□ -0.77
NECAB3-208	ENST00000480994	TMEM223	A0PJW6	202 aa		10.21	□□□□□ -0.77
NECAB3-208	ENST00000480994	LINC00310	P59036	64 aa		10.21	□□□□□ -0.77
NECAB3-208	ENST00000480994	COLCA2	A8K830	154 aa		10.2	□□□□□ -0.78
NECAB3-208	ENST00000480994	ZNF861P	O60384	105 aa		10.2	□□□□□ -0.78
NECAB3-208	ENST00000480994	KRTAP1-4	P0C5Y4	121 aa		10.2	□□□□□ -0.78
NECAB3-208	ENST00000480994	FAM19A2	Q8N3H0	131 aa		10.2	□□□□□ -0.78
NECAB3-208	ENST00000480994	LINC00167	Q96N53	147 aa		10.2	□□□□□ -0.78
NECAB3-208	ENST00000480994	SERF1A	O75920	110 aa		10.19	□□□□□ -0.78
NECAB3-208	ENST00000480994	PFN2	P35080	140 aa		10.19	□□□□□ -0.78
NECAB3-208	ENST00000480994	BCE1	O60756	84 aa		10.18	□□□□□ -0.78
NECAB3-208	ENST00000480994	NKAPP1	Q8N9T2	125 aa		10.18	□□□□□ -0.78
NECAB3-208	ENST00000480994	SND1-IT1	Q9HBX3	110 aa		10.18	□□□□□ -0.78
NECAB3-208	ENST00000480994	IGLV1-50	A0A075B6I6	118 aa		10.17	□□□□□ -0.78
NECAB3-208	ENST00000480994	LRP2	P98164	4655 aa		10.17	□□□□□ -0.78
NECAB3-208	ENST00000480994	UBR4	Q5T4S7	5183 aa		10.17	□□□□□ -0.78
NECAB3-208	ENST00000480994	LEPROTL1	O95214	131 aa		10.16	□□□□□ -0.78
NECAB3-208	ENST00000480994	VPREB1	P12018	145 aa		10.16	□□□□□ -0.78
NECAB3-208	ENST00000480994	RPL37AP8	A6NKH3	93 aa		10.14	□□□□□ -0.79
NECAB3-208	ENST00000480994	RPL28	P46779	137 aa	Known RBP	10.14	□□□□□ -0.79
NECAB3-208	ENST00000480994	PRR26	Q8N8Z3	221 aa		10.14	□□□□□ -0.79
NECAB3-208	ENST00000480994	RPL24	P83731	157 aa	Known RBP	10.13	□□□□□ -0.79
NECAB3-208	ENST00000480994	KRTAP13-1	Q8IUC0	172 aa		10.13	□□□□□ -0.79
NECAB3-208	ENST00000480994	HSPB8	Q9UJY1	196 aa		10.13	□□□□□ -0.79
NECAB3-208	ENST00000480994	GAGE10	A6NGK3	116 aa		10.12	□□□□□ -0.79
NECAB3-208	ENST00000480994	PLN	P26678	52 aa		10.12	□□□□□ -0.79
NECAB3-208	ENST00000480994	HERV-K104	P63124	156 aa		10.12	□□□□□ -0.79
NECAB3-208	ENST00000480994	RPL13A	P40429	203 aa	Known RBP	10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms