RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CHTOPQ9Y3Y2 248 aaKnown RBP12.96□□□□□ -0.33
CTSA-206ENST00000480961 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
CTSA-206ENST00000480961 SPACA4Q8TDM5 124 aa12.95□□□□□ -0.34
CTSA-206ENST00000480961 C6orf48Q9UBA6 75 aa12.95□□□□□ -0.34
CTSA-206ENST00000480961 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
CTSA-206ENST00000480961 H0Y8G0 127 aa12.94□□□□□ -0.34
CTSA-206ENST00000480961 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
CTSA-206ENST00000480961 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
CTSA-206ENST00000480961 CIRBPQ14011 172 aaKnown RBP12.94□□□□□ -0.34
CTSA-206ENST00000480961 MRPL35Q9NZE8 188 aaKnown RBP12.94□□□□□ -0.34
CTSA-206ENST00000480961 A0A087WYN8 130 aa12.93□□□□□ -0.34
CTSA-206ENST00000480961 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
CTSA-206ENST00000480961 F8WDY8 70 aa12.93□□□□□ -0.34
CTSA-206ENST00000480961 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
CTSA-206ENST00000480961 EPM2AB3EWF7 344 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 H3BRM9 83 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 CKS1BP61024 79 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
CTSA-206ENST00000480961 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 Q5VSD8 79 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 Q8IZM0 81 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
CTSA-206ENST00000480961 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
CTSA-206ENST00000480961 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
CTSA-206ENST00000480961 COX7B2Q8TF08 81 aa12.91□□□□□ -0.34
CTSA-206ENST00000480961 PTTG1IPP53801 180 aa12.9□□□□□ -0.34
CTSA-206ENST00000480961 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
CTSA-206ENST00000480961 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
CTSA-206ENST00000480961 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
CTSA-206ENST00000480961 STPG4Q8N801 248 aa12.89□□□□□ -0.35
CTSA-206ENST00000480961 HSPB8Q9UJY1 196 aa12.89□□□□□ -0.35
CTSA-206ENST00000480961 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
CTSA-206ENST00000480961 PLAC8Q9NZF1 115 aa12.87□□□□□ -0.35
CTSA-206ENST00000480961 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 F8VRH5 84 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 ODF1Q14990 250 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 Q6ZRP5 223 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 LINC00474Q9P2X8 69 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
CTSA-206ENST00000480961 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
CTSA-206ENST00000480961 PMCHL2Q9BQD1 86 aa12.85□□□□□ -0.35
CTSA-206ENST00000480961 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
CTSA-206ENST00000480961 TLX1NBP0CAT3 122 aa12.82□□□□□ -0.36
CTSA-206ENST00000480961 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
CTSA-206ENST00000480961 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
CTSA-206ENST00000480961 NDUFC2-KCTD14E9PQ53 114 aa12.81□□□□□ -0.36
CTSA-206ENST00000480961 CXCL5P42830 114 aa12.81□□□□□ -0.36
CTSA-206ENST00000480961 COA6Q5JTJ3 125 aaKnown RBP12.81□□□□□ -0.36
CTSA-206ENST00000480961 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
CTSA-206ENST00000480961 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
CTSA-206ENST00000480961 DPM2O94777 84 aa12.77□□□□□ -0.37
CTSA-206ENST00000480961 RPL37AP61513 92 aaKnown RBP12.77□□□□□ -0.37
CTSA-206ENST00000480961 SYS1-DBNDD2H3BUS1 97 aa12.76□□□□□ -0.37
CTSA-206ENST00000480961 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
CTSA-206ENST00000480961 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
CTSA-206ENST00000480961 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
CTSA-206ENST00000480961 INAFM2P0DMQ5 153 aa12.75□□□□□ -0.37
CTSA-206ENST00000480961 PLNP26678 52 aa12.75□□□□□ -0.37
CTSA-206ENST00000480961 KRTAP10-4P60372 401 aaPredicted RBP12.75□□□□□ -0.37
CTSA-206ENST00000480961 FAM19A5Q7Z5A7 132 aaPredicted RBP12.75□□□□□ -0.37
CTSA-206ENST00000480961 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
CTSA-206ENST00000480961 IGKCP01834 107 aa12.74□□□□□ -0.37
CTSA-206ENST00000480961 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
CTSA-206ENST00000480961 PFN2P35080 140 aa12.73□□□□□ -0.37
CTSA-206ENST00000480961 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
CTSA-206ENST00000480961 KRTAP7-1Q8IUC3 87 aa12.73□□□□□ -0.37
CTSA-206ENST00000480961 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
CTSA-206ENST00000480961 KRTDAPP60985 99 aa12.72□□□□□ -0.37
CTSA-206ENST00000480961 MYCBP2O75592 4640 aa12.71□□□□□ -0.38
CTSA-206ENST00000480961 TSPEAR-AS2P59090 65 aa12.69□□□□□ -0.38
CTSA-206ENST00000480961 SERTAD4-AS1Q5TG53 156 aa12.69□□□□□ -0.38
CTSA-206ENST00000480961 PET117Q6UWS5 81 aa12.69□□□□□ -0.38
CTSA-206ENST00000480961 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
CTSA-206ENST00000480961 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
CTSA-206ENST00000480961 A0A0U1RRA0 63 aa12.67□□□□□ -0.38
CTSA-206ENST00000480961 LEPROTO15243 131 aa12.67□□□□□ -0.38
CTSA-206ENST00000480961 HNRNPA3P51991 378 aaKnown RBP12.67□□□□□ -0.38
CTSA-206ENST00000480961 HERVK_113P61574 105 aa12.66□□□□□ -0.38
CTSA-206ENST00000480961 HIST3H2BBQ8N257 126 aa12.66□□□□□ -0.38
CTSA-206ENST00000480961 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
CTSA-206ENST00000480961 M0QXV9 152 aa12.65□□□□□ -0.38
CTSA-206ENST00000480961 S100A6P06703 90 aa12.65□□□□□ -0.38
CTSA-206ENST00000480961 PLEKHB2Q96CS7 222 aa12.65□□□□□ -0.38
CTSA-206ENST00000480961 LINC00158P58513 81 aa12.64□□□□□ -0.39
CTSA-206ENST00000480961 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
CTSA-206ENST00000480961 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
CTSA-206ENST00000480961 KRTAP11-1Q8IUC1 163 aa12.64□□□□□ -0.39
CTSA-206ENST00000480961 FLG2Q5D862 2391 aaPredicted RBP12.63□□□□□ -0.39
CTSA-206ENST00000480961 J3QQQ9 107 aa12.63□□□□□ -0.39
CTSA-206ENST00000480961 S100A2P29034 98 aa12.63□□□□□ -0.39
CTSA-206ENST00000480961 SMIM13P0DJ93 91 aa12.62□□□□□ -0.39
CTSA-206ENST00000480961 HIST1H2BLQ99880 126 aa12.62□□□□□ -0.39
CTSA-206ENST00000480961 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
CTSA-206ENST00000480961 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
CTSA-206ENST00000480961 MYMXA0A1B0GTQ4 84 aa12.61□□□□□ -0.39
CTSA-206ENST00000480961 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
CTSA-206ENST00000480961 COX17Q14061 63 aa12.61□□□□□ -0.39
CTSA-206ENST00000480961 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
CTSA-206ENST00000480961 PSORS1C2Q9UIG4 136 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms