RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 C9orf163Q8N9P6 203 aa7.65□□□□□ -1.18
TRAPPC12-219ENST00000479955 DNAH10Q8IVF4 4471 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 LINC00587B1AMM8 73 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 SLPIP03973 132 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 HERV-K104P63124 156 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 UNQ6190/PRO20217Q6UXQ8 127 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 Q6ZRU5 148 aa7.64□□□□□ -1.19
TRAPPC12-219ENST00000479955 C2orf82Q6UX34 121 aa7.63□□□□□ -1.19
TRAPPC12-219ENST00000479955 NDUFA12Q9UI09 145 aa7.63□□□□□ -1.19
TRAPPC12-219ENST00000479955 RYR3Q15413 4870 aa7.62□□□□□ -1.19
TRAPPC12-219ENST00000479955 GCSHP23434 173 aa7.62□□□□□ -1.19
TRAPPC12-219ENST00000479955 KRTAP10-2P60368 255 aa7.62□□□□□ -1.19
TRAPPC12-219ENST00000479955 FRAS1Q86XX4 4008 aa7.62□□□□□ -1.19
TRAPPC12-219ENST00000479955 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 COX17Q14061 63 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 PYY3Q5JQD4 70 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 C6orf48Q9UBA6 75 aa7.61□□□□□ -1.19
TRAPPC12-219ENST00000479955 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
TRAPPC12-219ENST00000479955 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
TRAPPC12-219ENST00000479955 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
TRAPPC12-219ENST00000479955 C16orf90A8MZG2 172 aa7.59□□□□□ -1.19
TRAPPC12-219ENST00000479955 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
TRAPPC12-219ENST00000479955 S100A12P80511 92 aa7.59□□□□□ -1.19
TRAPPC12-219ENST00000479955 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
TRAPPC12-219ENST00000479955 ERG28Q9UKR5 140 aa7.59□□□□□ -1.19
TRAPPC12-219ENST00000479955 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 LOC105371267A0A1B0GV96 52 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 ZNF815PA8K554 130 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 SDIM1Q6ZPB5 146 aa7.58□□□□□ -1.2
TRAPPC12-219ENST00000479955 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRAPPC12-219ENST00000479955 PAM16Q9Y3D7 125 aa7.57□□□□□ -1.2
TRAPPC12-219ENST00000479955 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
TRAPPC12-219ENST00000479955 SMIM6P0DI80 62 aa7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 PFN2P35080 140 aa7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 LINC00158P58513 81 aa7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 C9orf116Q5BN46 136 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-219ENST00000479955 A0A0J9YXY3 114 aa7.55□□□□□ -1.2
TRAPPC12-219ENST00000479955 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
TRAPPC12-219ENST00000479955 LINC01620Q4KN68 170 aa7.55□□□□□ -1.2
TRAPPC12-219ENST00000479955 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
TRAPPC12-219ENST00000479955 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
TRAPPC12-219ENST00000479955 DLEU1O43261 78 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 TIMM17BO60830 172 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 COX8AP10176 69 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 PTTG1IPP53801 180 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 Q6ZRP5 223 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 PCP2Q8IVA1 136 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 PKD1P98161 4303 aa7.54□□□□□ -1.2
TRAPPC12-219ENST00000479955 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
TRAPPC12-219ENST00000479955 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
TRAPPC12-219ENST00000479955 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
TRAPPC12-219ENST00000479955 BOD1L2Q8IYS8 172 aa7.53□□□□□ -1.2
TRAPPC12-219ENST00000479955 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
TRAPPC12-219ENST00000479955 A0A096LNI7 61 aa7.52□□□□□ -1.21
TRAPPC12-219ENST00000479955 IGKV2-24A0A0C4DH68 120 aa7.52□□□□□ -1.21
TRAPPC12-219ENST00000479955 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
TRAPPC12-219ENST00000479955 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
TRAPPC12-219ENST00000479955 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
TRAPPC12-219ENST00000479955 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
TRAPPC12-219ENST00000479955 SLC25A34Q6PIV7 304 aa7.51□□□□□ -1.21
TRAPPC12-219ENST00000479955 Q6ZVH6 145 aa7.51□□□□□ -1.21
TRAPPC12-219ENST00000479955 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
TRAPPC12-219ENST00000479955 Q6ZSA8 131 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 DNAH11Q96DT5 4516 aa7.5□□□□□ -1.21
TRAPPC12-219ENST00000479955 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
TRAPPC12-219ENST00000479955 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
TRAPPC12-219ENST00000479955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC12-219ENST00000479955 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-219ENST00000479955 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
TRAPPC12-219ENST00000479955 SPANXCQ9NY87 97 aa7.48□□□□□ -1.21
TRAPPC12-219ENST00000479955 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
TRAPPC12-219ENST00000479955 LOC107984156A0A0G2JMH3 177 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 IFITM1P13164 125 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 SRSF9Q13242 221 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 ARL17AQ8IVW1 177 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 LITAFQ99732 161 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 SPANXB1Q9NS25 103 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
TRAPPC12-219ENST00000479955 A0A087WYN8 130 aa7.46□□□□□ -1.22
TRAPPC12-219ENST00000479955 C12orf57Q99622 126 aa7.46□□□□□ -1.22
TRAPPC12-219ENST00000479955 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.22
TRAPPC12-219ENST00000479955 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms