RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
HDLBP-238ENST00000479894 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
HDLBP-238ENST00000479894 C5orf38Q86SI9 138 aa9.99□□□□□ -0.81
HDLBP-238ENST00000479894 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
HDLBP-238ENST00000479894 PKIGQ9Y2B9 76 aa9.99□□□□□ -0.81
HDLBP-238ENST00000479894 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-238ENST00000479894 F8VRH5 84 aa9.98□□□□□ -0.81
HDLBP-238ENST00000479894 PLNP26678 52 aa9.98□□□□□ -0.81
HDLBP-238ENST00000479894 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
HDLBP-238ENST00000479894 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
HDLBP-238ENST00000479894 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
HDLBP-238ENST00000479894 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
HDLBP-238ENST00000479894 C20orf202A1L168 122 aa9.96□□□□□ -0.82
HDLBP-238ENST00000479894 PRSS2P07478 247 aa9.96□□□□□ -0.82
HDLBP-238ENST00000479894 H0Y8G0 127 aa9.95□□□□□ -0.82
HDLBP-238ENST00000479894 COX6A2Q02221 97 aa9.95□□□□□ -0.82
HDLBP-238ENST00000479894 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
HDLBP-238ENST00000479894 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
HDLBP-238ENST00000479894 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
HDLBP-238ENST00000479894 SYS1-DBNDD2H3BUS1 97 aa9.94□□□□□ -0.82
HDLBP-238ENST00000479894 DPM2O94777 84 aa9.94□□□□□ -0.82
HDLBP-238ENST00000479894 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
HDLBP-238ENST00000479894 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
HDLBP-238ENST00000479894 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
HDLBP-238ENST00000479894 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
HDLBP-238ENST00000479894 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
HDLBP-238ENST00000479894 ODF1Q14990 250 aa9.93□□□□□ -0.82
HDLBP-238ENST00000479894 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
HDLBP-238ENST00000479894 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
HDLBP-238ENST00000479894 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
HDLBP-238ENST00000479894 CXCL5P42830 114 aa9.92□□□□□ -0.82
HDLBP-238ENST00000479894 HIGD2BQ4VC39 106 aa9.92□□□□□ -0.82
HDLBP-238ENST00000479894 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
HDLBP-238ENST00000479894 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
HDLBP-238ENST00000479894 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 KRTDAPP60985 99 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 CKS1BP61024 79 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 HERVK_113P61574 105 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 Q8IZM0 81 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
HDLBP-238ENST00000479894 KRTAP9-6A0A140TA67 174 aa9.9□□□□□ -0.82
HDLBP-238ENST00000479894 NDUFA1O15239 70 aa9.9□□□□□ -0.82
HDLBP-238ENST00000479894 IGKCP01834 107 aa9.9□□□□□ -0.82
HDLBP-238ENST00000479894 ZNF22P17026 224 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-238ENST00000479894 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
HDLBP-238ENST00000479894 C3orf79P0CE67 100 aa9.89□□□□□ -0.83
HDLBP-238ENST00000479894 RNF151Q2KHN1 245 aa9.89□□□□□ -0.83
HDLBP-238ENST00000479894 LINC01545Q5VT33 79 aa9.89□□□□□ -0.83
HDLBP-238ENST00000479894 LINC01600Q96MT4 127 aa9.89□□□□□ -0.83
HDLBP-238ENST00000479894 SMIM1B2RUZ4 78 aa9.88□□□□□ -0.83
HDLBP-238ENST00000479894 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
HDLBP-238ENST00000479894 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
HDLBP-238ENST00000479894 CARD19Q96LW7 228 aa9.88□□□□□ -0.83
HDLBP-238ENST00000479894 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
HDLBP-238ENST00000479894 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
HDLBP-238ENST00000479894 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
HDLBP-238ENST00000479894 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
HDLBP-238ENST00000479894 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
HDLBP-238ENST00000479894 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
HDLBP-238ENST00000479894 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
HDLBP-238ENST00000479894 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
HDLBP-238ENST00000479894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
HDLBP-238ENST00000479894 LINC00587B1AMM8 73 aa9.83□□□□□ -0.84
HDLBP-238ENST00000479894 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
HDLBP-238ENST00000479894 TMA7Q9Y2S6 64 aaKnown RBP9.83□□□□□ -0.84
HDLBP-238ENST00000479894 LOC107984640A0A0U1RRK4 108 aa9.82□□□□□ -0.84
HDLBP-238ENST00000479894 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
HDLBP-238ENST00000479894 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
HDLBP-238ENST00000479894 HSBP1L1C9JCN9 74 aa9.81□□□□□ -0.84
HDLBP-238ENST00000479894 LEPROTO15243 131 aa9.81□□□□□ -0.84
HDLBP-238ENST00000479894 SLPIP03973 132 aa9.81□□□□□ -0.84
HDLBP-238ENST00000479894 PANO1I0J062 215 aa9.8□□□□□ -0.84
HDLBP-238ENST00000479894 NMUP48645 174 aa9.8□□□□□ -0.84
HDLBP-238ENST00000479894 HERV-K104P63124 156 aa9.8□□□□□ -0.84
HDLBP-238ENST00000479894 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
HDLBP-238ENST00000479894 SDIM1Q6ZPB5 146 aa9.8□□□□□ -0.84
HDLBP-238ENST00000479894 MYMXA0A1B0GTQ4 84 aa9.79□□□□□ -0.84
HDLBP-238ENST00000479894 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
HDLBP-238ENST00000479894 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
HDLBP-238ENST00000479894 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
HDLBP-238ENST00000479894 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
HDLBP-238ENST00000479894 LPAP08519 4548 aa9.78□□□□□ -0.84
HDLBP-238ENST00000479894 E9PLD3 99 aa9.78□□□□□ -0.84
HDLBP-238ENST00000479894 TLX1NBP0CAT3 122 aa9.78□□□□□ -0.84
HDLBP-238ENST00000479894 COX17Q14061 63 aa9.78□□□□□ -0.84
HDLBP-238ENST00000479894 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
HDLBP-238ENST00000479894 J3QQQ9 107 aa9.77□□□□□ -0.85
HDLBP-238ENST00000479894 DPH3Q96FX2 82 aa9.77□□□□□ -0.85
HDLBP-238ENST00000479894 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
HDLBP-238ENST00000479894 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
HDLBP-238ENST00000479894 A0A0U1RQV1 116 aa9.75□□□□□ -0.85
HDLBP-238ENST00000479894 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
HDLBP-238ENST00000479894 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-238ENST00000479894 MUC2Q02817 5179 aa9.73□□□□□ -0.85
HDLBP-238ENST00000479894 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
HDLBP-238ENST00000479894 STPG4Q8N801 248 aa9.73□□□□□ -0.85
HDLBP-238ENST00000479894 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
HDLBP-238ENST00000479894 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms