RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TNXBP22105 4242 aa8.79□□□□□ -1
SMARCE1-209ENST00000478349 LINC01549A6NIU2 74 aa8.79□□□□□ -1
SMARCE1-209ENST00000478349 CXCL5P42830 114 aa8.79□□□□□ -1
SMARCE1-209ENST00000478349 ALKBH7Q9BT30 221 aaPredicted RBP8.79□□□□□ -1
SMARCE1-209ENST00000478349 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
SMARCE1-209ENST00000478349 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
SMARCE1-209ENST00000478349 TIMM17AQ99595 171 aa8.78□□□□□ -1
SMARCE1-209ENST00000478349 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SMARCE1-209ENST00000478349 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
SMARCE1-209ENST00000478349 F8VRH5 84 aa8.76□□□□□ -1.01
SMARCE1-209ENST00000478349 NUPR1O60356 82 aa8.76□□□□□ -1.01
SMARCE1-209ENST00000478349 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
SMARCE1-209ENST00000478349 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
SMARCE1-209ENST00000478349 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-209ENST00000478349 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
SMARCE1-209ENST00000478349 S100PP25815 95 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 XP32Q5T750 250 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 ERASQ7Z444 233 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 CARHSP1Q9Y2V2 147 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-209ENST00000478349 ZNF861PO60384 105 aa8.72□□□□□ -1.01
SMARCE1-209ENST00000478349 ZC2HC1BQ5TFG8 222 aa8.72□□□□□ -1.01
SMARCE1-209ENST00000478349 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
SMARCE1-209ENST00000478349 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
SMARCE1-209ENST00000478349 KRTAP7-1Q8IUC3 87 aa8.72□□□□□ -1.01
SMARCE1-209ENST00000478349 LRP2P98164 4655 aa8.71□□□□□ -1.01
SMARCE1-209ENST00000478349 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 COX19Q49B96 90 aa8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 CLLU1Q5K131 121 aa8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
SMARCE1-209ENST00000478349 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
SMARCE1-209ENST00000478349 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-209ENST00000478349 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
SMARCE1-209ENST00000478349 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
SMARCE1-209ENST00000478349 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
SMARCE1-209ENST00000478349 H3BRM9 83 aa8.68□□□□□ -1.02
SMARCE1-209ENST00000478349 GNB1LQ9BYB4 327 aa8.68□□□□□ -1.02
SMARCE1-209ENST00000478349 SMCO4Q9NRQ5 59 aa8.68□□□□□ -1.02
SMARCE1-209ENST00000478349 KIAA1644Q3SXP7 199 aa8.67□□□□□ -1.02
SMARCE1-209ENST00000478349 FA2HQ7L5A8 372 aa8.67□□□□□ -1.02
SMARCE1-209ENST00000478349 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-209ENST00000478349 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
SMARCE1-209ENST00000478349 BCE1O60756 84 aa8.66□□□□□ -1.02
SMARCE1-209ENST00000478349 ATP5LO75964 103 aa8.66□□□□□ -1.02
SMARCE1-209ENST00000478349 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
SMARCE1-209ENST00000478349 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
SMARCE1-209ENST00000478349 TMEM218A2RU14 115 aa8.65□□□□□ -1.02
SMARCE1-209ENST00000478349 PMVKQ15126 192 aa8.65□□□□□ -1.02
SMARCE1-209ENST00000478349 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
SMARCE1-209ENST00000478349 PRR4Q16378 134 aa8.64□□□□□ -1.03
SMARCE1-209ENST00000478349 SEC11CQ9BY50 192 aa8.64□□□□□ -1.03
SMARCE1-209ENST00000478349 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
SMARCE1-209ENST00000478349 CRYGAP11844 174 aa8.63□□□□□ -1.03
SMARCE1-209ENST00000478349 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
SMARCE1-209ENST00000478349 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
SMARCE1-209ENST00000478349 UBE2AP49459 152 aa8.62□□□□□ -1.03
SMARCE1-209ENST00000478349 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
SMARCE1-209ENST00000478349 FABP9Q0Z7S8 132 aa8.61□□□□□ -1.03
SMARCE1-209ENST00000478349 SFTA2Q6UW10 78 aa8.61□□□□□ -1.03
SMARCE1-209ENST00000478349 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
SMARCE1-209ENST00000478349 RAB5BP61020 215 aa8.6□□□□□ -1.03
SMARCE1-209ENST00000478349 RHEBQ15382 184 aa8.6□□□□□ -1.03
SMARCE1-209ENST00000478349 GAGE10A6NGK3 116 aa8.59□□□□□ -1.03
SMARCE1-209ENST00000478349 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
SMARCE1-209ENST00000478349 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
SMARCE1-209ENST00000478349 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
SMARCE1-209ENST00000478349 NDUFA6P56556 154 aa8.58□□□□□ -1.04
SMARCE1-209ENST00000478349 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
SMARCE1-209ENST00000478349 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-209ENST00000478349 COX17Q14061 63 aa8.57□□□□□ -1.04
SMARCE1-209ENST00000478349 PFN2P35080 140 aa8.56□□□□□ -1.04
SMARCE1-209ENST00000478349 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
SMARCE1-209ENST00000478349 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 TSPAN13O95857 204 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 HBDP02042 147 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 COMMD7Q86VX2 200 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
SMARCE1-209ENST00000478349 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
SMARCE1-209ENST00000478349 A0A087X002 238 aa8.54□□□□□ -1.04
SMARCE1-209ENST00000478349 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
SMARCE1-209ENST00000478349 LINC00614P0C842 121 aa8.53□□□□□ -1.04
SMARCE1-209ENST00000478349 ZNF22P17026 224 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-209ENST00000478349 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
SMARCE1-209ENST00000478349 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
SMARCE1-209ENST00000478349 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
SMARCE1-209ENST00000478349 CTAG1AP78358 180 aa8.51□□□□□ -1.05
SMARCE1-209ENST00000478349 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
SMARCE1-209ENST00000478349 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
SMARCE1-209ENST00000478349 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
SMARCE1-209ENST00000478349 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
SMARCE1-209ENST00000478349 VPREB1P12018 145 aa8.5□□□□□ -1.05
SMARCE1-209ENST00000478349 NDUFA5Q16718 116 aa8.5□□□□□ -1.05
SMARCE1-209ENST00000478349 C10orf91Q5T1B1 145 aa8.5□□□□□ -1.05
SMARCE1-209ENST00000478349 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms