RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 Q5VSD8 79 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 STPG4Q8N801 248 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 TRAV13-1A0A0B4J241 112 aa5.39□□□□□ -1.55
HDAC6-221ENST00000477561 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-221ENST00000477561 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
HDAC6-221ENST00000477561 ANKRD39Q53RE8 183 aa5.39□□□□□ -1.55
HDAC6-221ENST00000477561 PRO1933Q9H354 126 aa5.39□□□□□ -1.55
HDAC6-221ENST00000477561 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
HDAC6-221ENST00000477561 TRAV8-4A0A0B4J246 113 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 E9PLD3 99 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 ZNF22P17026 224 aaPredicted RBP5.38□□□□□ -1.55
HDAC6-221ENST00000477561 NMUP48645 174 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 SS18Q15532 418 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 MIEN1Q9BRT3 115 aa5.38□□□□□ -1.55
HDAC6-221ENST00000477561 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 IGLV5-45A0A087WSX0 123 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 LINC00959A0A1B0GUT2 108 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 TMEM223A0PJW6 202 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 GAGE12HA6NDE8 117 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 PCP4L1A6NKN8 68 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 COX8AP10176 69 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 LINC00242Q5T6M2 205 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 Q6ZSA8 131 aa5.37□□□□□ -1.55
HDAC6-221ENST00000477561 LEPROTO15243 131 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 DLEU1O43261 78 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 DDTP30046 118 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 SCXQ7RTU7 201 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 PLEKHB2Q96CS7 222 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 C14orf144Q96I85 54 aa5.36□□□□□ -1.55
HDAC6-221ENST00000477561 IGHV1-58A0A0C4DH39 117 aa5.35□□□□□ -1.55
HDAC6-221ENST00000477561 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
HDAC6-221ENST00000477561 HNRNPA3P51991 378 aaKnown RBP5.35□□□□□ -1.55
HDAC6-221ENST00000477561 BOD1L2Q8IYS8 172 aa5.35□□□□□ -1.55
HDAC6-221ENST00000477561 CHCHD10Q8WYQ3 142 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-221ENST00000477561 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
HDAC6-221ENST00000477561 SRRM2Q9UQ35 2752 aaKnown RBP5.34□□□□□ -1.55
HDAC6-221ENST00000477561 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 J3QQQ9 107 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 SLPIP03973 132 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 XCL1P47992 114 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 COX6A2Q02221 97 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 HIGD2BQ4VC39 106 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 CD164L2Q6UWJ8 174 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 LINC01561Q8N1V8 128 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 CIRBP-AS1Q8TBR5 109 aa5.34□□□□□ -1.55
HDAC6-221ENST00000477561 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
HDAC6-221ENST00000477561 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
HDAC6-221ENST00000477561 SPINK8P0C7L1 97 aa5.33□□□□□ -1.56
HDAC6-221ENST00000477561 PCP2Q8IVA1 136 aa5.33□□□□□ -1.56
HDAC6-221ENST00000477561 C15orf56Q8N910 161 aa5.33□□□□□ -1.56
HDAC6-221ENST00000477561 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 A0A087WZ39 114 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 ZNF815PA8K554 130 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 PANO1I0J062 215 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 COX7A2LO14548 114 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 FOXI1Q12951 378 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 SDIM1Q6ZPB5 146 aa5.32□□□□□ -1.56
HDAC6-221ENST00000477561 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-221ENST00000477561 MYCBP2O75592 4640 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 APOMO95445 188 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
HDAC6-221ENST00000477561 MALP21145 153 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
HDAC6-221ENST00000477561 SFTA2Q6UW10 78 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 LINC00526Q96FQ7 95 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 DPH3Q96FX2 82 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
HDAC6-221ENST00000477561 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-221ENST00000477561 CHTF8P0CG12 524 aa5.3□□□□□ -1.56
HDAC6-221ENST00000477561 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
HDAC6-221ENST00000477561 CTAG1AP78358 180 aa5.3□□□□□ -1.56
HDAC6-221ENST00000477561 TTTY13Q9BZ97 58 aa5.3□□□□□ -1.56
HDAC6-221ENST00000477561 NDUFA12Q9UI09 145 aa5.3□□□□□ -1.56
HDAC6-221ENST00000477561 LINC00587B1AMM8 73 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 NDUFA1O15239 70 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 PRSS2P07478 247 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 HERV-K104P63124 156 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 TOMM7Q9P0U1 55 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 HERC1Q15751 4861 aa5.29□□□□□ -1.56
HDAC6-221ENST00000477561 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-221ENST00000477561 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 M0R143 59 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 CXCL5P42830 114 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 HSD52Q0P140 79 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
HDAC6-221ENST00000477561 TAL2Q16559 108 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 Q8IZM0 81 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms