RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TMEM170BQ5T4T1 132 aa7.56□□□□□ -1.2
LSM2-212ENST00000477182 LINC00528Q8N1L1 170 aa7.56□□□□□ -1.2
LSM2-212ENST00000477182 NTN5Q8WTR8 489 aaPredicted RBP7.56□□□□□ -1.2
LSM2-212ENST00000477182 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
LSM2-212ENST00000477182 H3BRM9 83 aa7.55□□□□□ -1.2
LSM2-212ENST00000477182 SPINK8P0C7L1 97 aa7.55□□□□□ -1.2
LSM2-212ENST00000477182 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
LSM2-212ENST00000477182 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
LSM2-212ENST00000477182 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
LSM2-212ENST00000477182 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
LSM2-212ENST00000477182 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
LSM2-212ENST00000477182 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
LSM2-212ENST00000477182 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 APOMO95445 188 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 AKR1D1P51857 326 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 CFAP161Q6P656 301 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
LSM2-212ENST00000477182 TMEM223A0PJW6 202 aa7.52□□□□□ -1.21
LSM2-212ENST00000477182 LRP2P98164 4655 aa7.52□□□□□ -1.21
LSM2-212ENST00000477182 GVQW2A0A096LPI5 108 aaPredicted RBP7.51□□□□□ -1.21
LSM2-212ENST00000477182 hDV102S1A0JD36 115 aa7.51□□□□□ -1.21
LSM2-212ENST00000477182 SPAG11BQ08648 103 aa7.51□□□□□ -1.21
LSM2-212ENST00000477182 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
LSM2-212ENST00000477182 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
LSM2-212ENST00000477182 FAM30AQ9NZY2 134 aa7.51□□□□□ -1.21
LSM2-212ENST00000477182 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
LSM2-212ENST00000477182 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
LSM2-212ENST00000477182 HERVK_113P61574 105 aa7.5□□□□□ -1.21
LSM2-212ENST00000477182 C14orf177Q52M58 125 aa7.5□□□□□ -1.21
LSM2-212ENST00000477182 STPG4Q8N801 248 aa7.5□□□□□ -1.21
LSM2-212ENST00000477182 LOC105371267A0A1B0GV96 52 aa7.49□□□□□ -1.21
LSM2-212ENST00000477182 ZNF561-AS1K7EIQ3 104 aa7.49□□□□□ -1.21
LSM2-212ENST00000477182 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
LSM2-212ENST00000477182 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
LSM2-212ENST00000477182 DNAH8Q96JB1 4490 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.48□□□□□ -1.21
LSM2-212ENST00000477182 PRSS2P07478 247 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 MAJINQ3KP22 176 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 Q8IZM0 81 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 Q8N814 137 aa7.48□□□□□ -1.21
LSM2-212ENST00000477182 LEPROTO15243 131 aa7.47□□□□□ -1.21
LSM2-212ENST00000477182 ANKRD39Q53RE8 183 aa7.47□□□□□ -1.21
LSM2-212ENST00000477182 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
LSM2-212ENST00000477182 Q6ZSA8 131 aa7.47□□□□□ -1.21
LSM2-212ENST00000477182 E9PLD3 99 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 SLPIP03973 132 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 C2orf82Q6UX34 121 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 PLEKHB2Q96CS7 222 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.22
LSM2-212ENST00000477182 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
LSM2-212ENST00000477182 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
LSM2-212ENST00000477182 J3QQQ9 107 aa7.45□□□□□ -1.22
LSM2-212ENST00000477182 CKS1BP61024 79 aa7.45□□□□□ -1.22
LSM2-212ENST00000477182 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
LSM2-212ENST00000477182 NDUFA1O15239 70 aa7.44□□□□□ -1.22
LSM2-212ENST00000477182 LGALS3P17931 250 aaKnown RBP7.44□□□□□ -1.22
LSM2-212ENST00000477182 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
LSM2-212ENST00000477182 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
LSM2-212ENST00000477182 C10orf25Q5T742 122 aa7.44□□□□□ -1.22
LSM2-212ENST00000477182 Q6ZRU5 148 aa7.44□□□□□ -1.22
LSM2-212ENST00000477182 F8WDY8 70 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 CXCL5P42830 114 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 NMUP48645 174 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
LSM2-212ENST00000477182 CARD19Q96LW7 228 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 VAMP8Q9BV40 100 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 NDUFA12Q9UI09 145 aa7.43□□□□□ -1.22
LSM2-212ENST00000477182 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
LSM2-212ENST00000477182 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
LSM2-212ENST00000477182 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
LSM2-212ENST00000477182 PAM16Q9Y3D7 125 aa7.42□□□□□ -1.22
LSM2-212ENST00000477182 SPATA45Q537H7 98 aa7.41□□□□□ -1.22
LSM2-212ENST00000477182 C6orf48Q9UBA6 75 aa7.41□□□□□ -1.22
LSM2-212ENST00000477182 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
LSM2-212ENST00000477182 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
LSM2-212ENST00000477182 SMIM6P0DI80 62 aa7.4□□□□□ -1.22
LSM2-212ENST00000477182 LINC01620Q4KN68 170 aa7.4□□□□□ -1.22
LSM2-212ENST00000477182 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
LSM2-212ENST00000477182 PCP2Q8IVA1 136 aa7.4□□□□□ -1.22
LSM2-212ENST00000477182 TRBV30A0A0K0K1B3 111 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 ZNF815PA8K554 130 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 RNF151Q2KHN1 245 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 SCXQ7RTU7 201 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 C9orf163Q8N9P6 203 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 KRTAP9-2Q9BYQ4 174 aa7.39□□□□□ -1.23
LSM2-212ENST00000477182 HERV-K104P63124 156 aa7.38□□□□□ -1.23
LSM2-212ENST00000477182 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
LSM2-212ENST00000477182 S100A12P80511 92 aa7.37□□□□□ -1.23
LSM2-212ENST00000477182 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
LSM2-212ENST00000477182 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
LSM2-212ENST00000477182 COX8AP10176 69 aa7.36□□□□□ -1.23
LSM2-212ENST00000477182 PFN2P35080 140 aa7.36□□□□□ -1.23
LSM2-212ENST00000477182 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms