RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IMUPQ9GZP8 106 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 C14orf132Q9NPU4 83 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 SHANK1Q9Y566 2161 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 NCOA6Q14686 2063 aaPredicted RBP3.23□□□□□ -1.89
CCNL1-215ENST00000474539 SPEGQ15772 3267 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 ESRGQ1W209 222 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 PLCE1Q9P212 2302 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 LINC00315P59091 139 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 IGLV4-60A0A075B6I1 120 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 IGKV2-28A0A075B6P5 120 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 IGKV2D-28P01615 120 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 C9orf116Q5BN46 136 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-215ENST00000474539 Q9BRP9 147 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 C11orf21Q9P2W6 132 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 IGLV9-49A0A0B4J1Y8 123 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 COX6A2Q02221 97 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 Q6ZQY7 126 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 Q8N9L7 120 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 ATRXP46100 2492 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 DOPEY2Q9Y3R5 2298 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 WDFY4Q6ZS81 3184 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 NCOR2Q9Y618 2525 aa3.22□□□□□ -1.89
CCNL1-215ENST00000474539 TAX1BP3O14907 124 aa3.21□□□□□ -1.89
CCNL1-215ENST00000474539 UNQ6190/PRO20217Q6UXQ8 127 aa3.21□□□□□ -1.89
CCNL1-215ENST00000474539 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.89
CCNL1-215ENST00000474539 ETDBQ3ZM63 59 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 NOTCH2Q04721 2471 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 LOC105371267A0A1B0GV96 52 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 BCE1O60756 84 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 BDP1A6H8Y1 2624 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 C22orf24Q9Y442 160 aa3.21□□□□□ -1.9
CCNL1-215ENST00000474539 SPG11Q96JI7 2443 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00588Q9Y4M8 146 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 SPINK6Q6UWN8 80 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00612Q8N6U2 182 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 CELA1Q9UNI1 258 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 LINC01546A6NGU7 62 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 Q6ZSN1 163 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 Q6ZVQ6 151 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 KIAA1549Q9HCM3 1950 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 C5orf42Q9H799 3197 aa3.2□□□□□ -1.9
CCNL1-215ENST00000474539 ZFHX4Q86UP3 3567 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 TRBV10-3A0A0K0K1G6 114 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 Q6ZRU5 148 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 PLA2G2DQ9UNK4 145 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 IGLV5-45A0A087WSX0 123 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 Q8N814 137 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 SMIM11BQ8TCY0 68 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 H3BPC8 53 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 FXYD2P54710 66 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 NTM-AS1Q6ZSK4 140 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
CCNL1-215ENST00000474539 PTPN13Q12923 2485 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 K7ERJ3 54 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 TLX1NBP0CAT3 122 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 A0A096LNI7 61 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 KRTAP1-3Q8IUG1 177 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
CCNL1-215ENST00000474539 FOXI1Q12951 378 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 IGHV3OR16-9A0A0B4J2B5 98 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 ATP11AUNQ6ZP68 121 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 ABCA2Q9BZC7 2435 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
CCNL1-215ENST00000474539 KRTAP1-1Q07627 177 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 ZNF575Q86XF7 245 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00476Q8WZB0 136 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 A0A087WTM6 91 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 TRIAP1O43715 76 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
CCNL1-215ENST00000474539 A0A0C4DFX4 3053 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 FRYLO94915 3013 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 XGP55808 180 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00526Q96FQ7 95 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 PSORS1C2Q9UIG4 136 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 CHD7Q9P2D1 2997 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 FAM30AQ9NZY2 134 aa3.16□□□□□ -1.9
CCNL1-215ENST00000474539 UQCRQO14949 82 aa3.15□□□□□ -1.9
CCNL1-215ENST00000474539 CSNK1G2-AS1Q8NCQ2 148 aa3.15□□□□□ -1.9
CCNL1-215ENST00000474539 CSPG4Q6UVK1 2322 aa3.15□□□□□ -1.9
CCNL1-215ENST00000474539 TRIOO75962 3097 aa3.15□□□□□ -1.9
CCNL1-215ENST00000474539 LINC00167Q96N53 147 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 KRTAP10-11P60412 298 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 VPS13AQ96RL7 3174 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 LINC00694P0DN24 101 aa3.15□□□□□ -1.91
CCNL1-215ENST00000474539 CXCL6P80162 114 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms