RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
DDX56-209ENST00000473924 A0A096LNI7 61 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 F8VRH5 84 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 PANO1I0J062 215 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
DDX56-209ENST00000473924 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 MAJINQ3KP22 176 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 C10orf25Q5T742 122 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 Q8N1X5 172 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 LINC00474Q9P2X8 69 aa7.93□□□□□ -1.14
DDX56-209ENST00000473924 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
DDX56-209ENST00000473924 CXCL5P42830 114 aa7.92□□□□□ -1.14
DDX56-209ENST00000473924 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
DDX56-209ENST00000473924 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
DDX56-209ENST00000473924 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
DDX56-209ENST00000473924 CIRBPQ14011 172 aaKnown RBP7.91□□□□□ -1.14
DDX56-209ENST00000473924 ODF1Q14990 250 aa7.91□□□□□ -1.14
DDX56-209ENST00000473924 A0A087WYN8 130 aa7.9□□□□□ -1.14
DDX56-209ENST00000473924 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
DDX56-209ENST00000473924 PTTG1IPP53801 180 aa7.9□□□□□ -1.14
DDX56-209ENST00000473924 COA6Q5JTJ3 125 aaKnown RBP7.9□□□□□ -1.14
DDX56-209ENST00000473924 STPG4Q8N801 248 aa7.89□□□□□ -1.15
DDX56-209ENST00000473924 IGLV5-39A0A0G2JS06 123 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 TLX1NBP0CAT3 122 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 PLNP26678 52 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 C9orf116Q5BN46 136 aaPredicted RBP7.88□□□□□ -1.15
DDX56-209ENST00000473924 Q5VSD8 79 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
DDX56-209ENST00000473924 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
DDX56-209ENST00000473924 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 DPM2O94777 84 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 Q6ZRP5 223 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 PMCHL2Q9BQD1 86 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 RYR1P21817 5038 aa7.87□□□□□ -1.15
DDX56-209ENST00000473924 SYS1-DBNDD2H3BUS1 97 aa7.86□□□□□ -1.15
DDX56-209ENST00000473924 IGKCP01834 107 aa7.85□□□□□ -1.15
DDX56-209ENST00000473924 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
DDX56-209ENST00000473924 S100A6P06703 90 aa7.85□□□□□ -1.15
DDX56-209ENST00000473924 HERC2O95714 4834 aa7.84□□□□□ -1.15
DDX56-209ENST00000473924 HERVK_113P61574 105 aa7.84□□□□□ -1.15
DDX56-209ENST00000473924 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
DDX56-209ENST00000473924 HSPG2P98160 4391 aa7.84□□□□□ -1.15
DDX56-209ENST00000473924 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 S100A2P29034 98 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 KRTDAPP60985 99 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 C7orf33Q8WU49 177 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
DDX56-209ENST00000473924 A0A1W2PNN7 141 aa7.82□□□□□ -1.16
DDX56-209ENST00000473924 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
DDX56-209ENST00000473924 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
DDX56-209ENST00000473924 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
DDX56-209ENST00000473924 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
DDX56-209ENST00000473924 PFN2P35080 140 aa7.81□□□□□ -1.16
DDX56-209ENST00000473924 LINC01545Q5VT33 79 aa7.81□□□□□ -1.16
DDX56-209ENST00000473924 XAGE1AQ9HD64 81 aa7.81□□□□□ -1.16
DDX56-209ENST00000473924 FAM168BA1KXE4 195 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 C20orf202A1L168 122 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 LEPROTO15243 131 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
DDX56-209ENST00000473924 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
DDX56-209ENST00000473924 HIST3H2BBQ8N257 126 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 PLEKHB2Q96CS7 222 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
DDX56-209ENST00000473924 COX17Q14061 63 aa7.79□□□□□ -1.16
DDX56-209ENST00000473924 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
DDX56-209ENST00000473924 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
DDX56-209ENST00000473924 J3QQQ9 107 aa7.78□□□□□ -1.16
DDX56-209ENST00000473924 LGALS3P17931 250 aaKnown RBP7.78□□□□□ -1.16
DDX56-209ENST00000473924 HERV-K104P63124 156 aa7.78□□□□□ -1.16
DDX56-209ENST00000473924 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
DDX56-209ENST00000473924 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
DDX56-209ENST00000473924 LINC00158P58513 81 aa7.77□□□□□ -1.17
DDX56-209ENST00000473924 SNRPEP62304 92 aaKnown RBP7.77□□□□□ -1.17
DDX56-209ENST00000473924 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
DDX56-209ENST00000473924 HIST1H2BLQ99880 126 aa7.77□□□□□ -1.17
DDX56-209ENST00000473924 A0A0U1RRA0 63 aa7.76□□□□□ -1.17
DDX56-209ENST00000473924 M0QXV9 152 aa7.76□□□□□ -1.17
DDX56-209ENST00000473924 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
DDX56-209ENST00000473924 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
DDX56-209ENST00000473924 E9PLD3 99 aa7.75□□□□□ -1.17
DDX56-209ENST00000473924 NMUP48645 174 aa7.75□□□□□ -1.17
DDX56-209ENST00000473924 AKR1D1P51857 326 aa7.75□□□□□ -1.17
DDX56-209ENST00000473924 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
DDX56-209ENST00000473924 SMIM13P0DJ93 91 aa7.74□□□□□ -1.17
DDX56-209ENST00000473924 UBE2BP63146 152 aa7.74□□□□□ -1.17
DDX56-209ENST00000473924 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
DDX56-209ENST00000473924 SND1-IT1Q9HBX3 110 aa7.74□□□□□ -1.17
DDX56-209ENST00000473924 C5orf52A6NGY3 159 aa7.73□□□□□ -1.17
DDX56-209ENST00000473924 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
DDX56-209ENST00000473924 ATOH7Q8N100 152 aa7.73□□□□□ -1.17
DDX56-209ENST00000473924 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
DDX56-209ENST00000473924 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms