RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CCL25O15444 150 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 ATP5LO75964 103 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 XCL1P47992 114 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 RPL39P62891 51 aaKnown RBP5.83□□□□□ -1.48
MCF2L-223ENST00000473345 SMAGPQ0VAQ4 97 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 PYY3Q5JQD4 70 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 MRPL52Q86TS9 123 aaKnown RBP5.83□□□□□ -1.48
MCF2L-223ENST00000473345 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
MCF2L-223ENST00000473345 CSDC2Q9Y534 153 aaKnown RBP5.83□□□□□ -1.48
MCF2L-223ENST00000473345 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
MCF2L-223ENST00000473345 SYS1-DBNDD2H3BUS1 97 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 GHRHP01286 108 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 FGF6P10767 208 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 AKR1D1P51857 326 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 PTTG1IPP53801 180 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 PET117Q6UWS5 81 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
MCF2L-223ENST00000473345 TMEM141Q96I45 108 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 UBE2D4Q9Y2X8 147 aa5.82□□□□□ -1.48
MCF2L-223ENST00000473345 TRAV12-1A0A0B4J245 112 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 LINC00959A0A1B0GUT2 108 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 SMIM6P0DI80 62 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 MRPS36P82909 103 aaKnown RBP5.81□□□□□ -1.48
MCF2L-223ENST00000473345 GAGE2BQ13066 116 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 OR5A1Q8NGJ0 315 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 SPANXA1Q9NS26 97 aa5.81□□□□□ -1.48
MCF2L-223ENST00000473345 IGLV4-3A0A075B6K6 122 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 KRTDAPP60985 99 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 AMELXQ99217 191 aa5.8□□□□□ -1.48
MCF2L-223ENST00000473345 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
MCF2L-223ENST00000473345 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
MCF2L-223ENST00000473345 Q6ZN92 141 aa5.79□□□□□ -1.48
MCF2L-223ENST00000473345 TEX43Q6ZNM6 134 aa5.79□□□□□ -1.48
MCF2L-223ENST00000473345 LINC00518Q8N0U6 118 aa5.79□□□□□ -1.48
MCF2L-223ENST00000473345 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 PMVKQ15126 192 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 SS18Q15532 418 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 C1orf137Q5JT78 98 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 PAPPA-AS1Q5QFB9 102 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 CD164L2Q6UWJ8 174 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 FAM19A3Q7Z5A8 133 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 OPRPNQ99935 248 aaPredicted RBP5.78□□□□□ -1.48
MCF2L-223ENST00000473345 CST9LQ9H4G1 147 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 CDC42SE2Q9NRR3 84 aa5.78□□□□□ -1.48
MCF2L-223ENST00000473345 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
MCF2L-223ENST00000473345 SCGB1D1O95968 90 aa5.77□□□□□ -1.49
MCF2L-223ENST00000473345 LOC107984640A0A0U1RRK4 108 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 C20orf202A1L168 122 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 F8VRH5 84 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 F8WDY8 70 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
MCF2L-223ENST00000473345 ZC2HC1BQ5TFG8 222 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 Q6ZUT4 128 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 ZNF664Q8N3J9 261 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 VCX2Q9H322 139 aa5.76□□□□□ -1.49
MCF2L-223ENST00000473345 MRPL35Q9NZE8 188 aaKnown RBP5.76□□□□□ -1.49
MCF2L-223ENST00000473345 C12orf57Q99622 126 aa5.75□□□□□ -1.49
MCF2L-223ENST00000473345 CHTOPQ9Y3Y2 248 aaKnown RBP5.75□□□□□ -1.49
MCF2L-223ENST00000473345 H0Y8G0 127 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 H0Y9J4 135 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 DPM2O94777 84 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 APOMO95445 188 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 IGKCP01834 107 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 IGLC3P0DOY3 106 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 PLNP26678 52 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 UBE2D1P51668 147 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 C10orf25Q5T742 122 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 C2orf48Q96LS8 159 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 PMCHL2Q9BQD1 86 aa5.74□□□□□ -1.49
MCF2L-223ENST00000473345 COX7A2LO14548 114 aa5.73□□□□□ -1.49
MCF2L-223ENST00000473345 MALP21145 153 aa5.73□□□□□ -1.49
MCF2L-223ENST00000473345 RPL18AQ02543 176 aaKnown RBP5.73□□□□□ -1.49
MCF2L-223ENST00000473345 PRR4Q16378 134 aa5.73□□□□□ -1.49
MCF2L-223ENST00000473345 C5orf38Q86SI9 138 aa5.73□□□□□ -1.49
MCF2L-223ENST00000473345 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 TINCRA0A1B0GVN0 87 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 C11orf86A6NJI1 115 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
MCF2L-223ENST00000473345 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 CAMK2N2Q96S95 79 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
MCF2L-223ENST00000473345 SEC11AP67812 179 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 S100A12P80511 92 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 LINC00242Q5T6M2 205 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 DIRC1Q969H9 104 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 C2orf88Q9BSF0 95 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 VAMP8Q9BV40 100 aa5.71□□□□□ -1.5
MCF2L-223ENST00000473345 A0A087WZ39 114 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms