RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 RETNQ9HD89 108 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 WFDC9Q8NEX5 89 aa10.35□□□□□ -0.75
UBXN11-213ENST00000472155 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
UBXN11-213ENST00000472155 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
UBXN11-213ENST00000472155 PPDPFLQ8WWR9 84 aa10.35□□□□□ -0.75
UBXN11-213ENST00000472155 HERV-K104P63124 156 aa10.34□□□□□ -0.75
UBXN11-213ENST00000472155 LINC00158P58513 81 aa10.34□□□□□ -0.75
UBXN11-213ENST00000472155 NBEAL1Q6ZS30 2694 aa10.33□□□□□ -0.76
UBXN11-213ENST00000472155 KRTAP10-11P60412 298 aa10.33□□□□□ -0.76
UBXN11-213ENST00000472155 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
UBXN11-213ENST00000472155 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
UBXN11-213ENST00000472155 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
UBXN11-213ENST00000472155 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
UBXN11-213ENST00000472155 LST1O00453 97 aa10.32□□□□□ -0.76
UBXN11-213ENST00000472155 TRBV10-2A0A0K0K1G8 114 aa10.31□□□□□ -0.76
UBXN11-213ENST00000472155 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
UBXN11-213ENST00000472155 CCL18P55774 89 aa10.31□□□□□ -0.76
UBXN11-213ENST00000472155 ATP5G1P05496 136 aa10.3□□□□□ -0.76
UBXN11-213ENST00000472155 COX6CP09669 75 aa10.3□□□□□ -0.76
UBXN11-213ENST00000472155 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
UBXN11-213ENST00000472155 FAM218AQ96MZ4 157 aa10.3□□□□□ -0.76
UBXN11-213ENST00000472155 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
UBXN11-213ENST00000472155 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
UBXN11-213ENST00000472155 SS18Q15532 418 aa10.29□□□□□ -0.76
UBXN11-213ENST00000472155 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
UBXN11-213ENST00000472155 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
UBXN11-213ENST00000472155 MIFP14174 115 aa10.29□□□□□ -0.76
UBXN11-213ENST00000472155 MT-ATP8P03928 68 aa10.28□□□□□ -0.76
UBXN11-213ENST00000472155 XGP55808 180 aa10.28□□□□□ -0.76
UBXN11-213ENST00000472155 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
UBXN11-213ENST00000472155 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.76
UBXN11-213ENST00000472155 REG3AQ06141 175 aa10.27□□□□□ -0.76
UBXN11-213ENST00000472155 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.76
UBXN11-213ENST00000472155 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.76
UBXN11-213ENST00000472155 WIPF1O43516 503 aa10.26□□□□□ -0.77
UBXN11-213ENST00000472155 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
UBXN11-213ENST00000472155 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
UBXN11-213ENST00000472155 COX7A2LO14548 114 aa10.26□□□□□ -0.77
UBXN11-213ENST00000472155 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
UBXN11-213ENST00000472155 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
UBXN11-213ENST00000472155 M0QXV9 152 aa10.24□□□□□ -0.77
UBXN11-213ENST00000472155 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
UBXN11-213ENST00000472155 Q9HAA7 133 aa10.23□□□□□ -0.77
UBXN11-213ENST00000472155 CRPP02741 224 aa10.23□□□□□ -0.77
UBXN11-213ENST00000472155 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
UBXN11-213ENST00000472155 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
UBXN11-213ENST00000472155 BAHCC1Q9P281 2608 aa10.22□□□□□ -0.77
UBXN11-213ENST00000472155 MRPL23Q16540 153 aaKnown RBP10.22□□□□□ -0.77
UBXN11-213ENST00000472155 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
UBXN11-213ENST00000472155 Q8IZM0 81 aa10.22□□□□□ -0.77
UBXN11-213ENST00000472155 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
UBXN11-213ENST00000472155 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
UBXN11-213ENST00000472155 CYSRT1A8MQ03 144 aa10.21□□□□□ -0.77
UBXN11-213ENST00000472155 Q8NDZ9 215 aa10.21□□□□□ -0.77
UBXN11-213ENST00000472155 LINC01600Q96MT4 127 aa10.21□□□□□ -0.77
UBXN11-213ENST00000472155 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
UBXN11-213ENST00000472155 C10orf25Q5T742 122 aa10.21□□□□□ -0.78
UBXN11-213ENST00000472155 Q6ZTC4 211 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 A0A087WYN8 130 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 H3BT86 120 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 MALP21145 153 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 LELP1Q5T871 98 aa10.2□□□□□ -0.78
UBXN11-213ENST00000472155 PRB2P02812 416 aaPredicted RBP10.19□□□□□ -0.78
UBXN11-213ENST00000472155 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
UBXN11-213ENST00000472155 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
UBXN11-213ENST00000472155 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
UBXN11-213ENST00000472155 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
UBXN11-213ENST00000472155 MGAM2Q2M2H8 2515 aa10.18□□□□□ -0.78
UBXN11-213ENST00000472155 WFDC10BQ8IUB3 73 aa10.18□□□□□ -0.78
UBXN11-213ENST00000472155 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
UBXN11-213ENST00000472155 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
UBXN11-213ENST00000472155 C3orf56Q8N813 242 aa10.16□□□□□ -0.78
UBXN11-213ENST00000472155 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
UBXN11-213ENST00000472155 HUWE1Q7Z6Z7 4374 aaKnown RBP10.16□□□□□ -0.78
UBXN11-213ENST00000472155 BAALC-AS2P0C853 105 aa10.15□□□□□ -0.78
UBXN11-213ENST00000472155 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
UBXN11-213ENST00000472155 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
UBXN11-213ENST00000472155 NANOS2P60321 138 aaKnown RBP10.14□□□□□ -0.79
UBXN11-213ENST00000472155 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
UBXN11-213ENST00000472155 SLPIP03973 132 aa10.14□□□□□ -0.79
UBXN11-213ENST00000472155 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
UBXN11-213ENST00000472155 LYSTQ99698 3801 aa10.14□□□□□ -0.79
UBXN11-213ENST00000472155 EGFEM1PQ0D2K5 195 aa10.13□□□□□ -0.79
UBXN11-213ENST00000472155 TRACP01848 142 aa10.13□□□□□ -0.79
UBXN11-213ENST00000472155 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
UBXN11-213ENST00000472155 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
UBXN11-213ENST00000472155 LINC01561Q8N1V8 128 aa10.12□□□□□ -0.79
UBXN11-213ENST00000472155 NCR3O14931 201 aa10.11□□□□□ -0.79
UBXN11-213ENST00000472155 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
UBXN11-213ENST00000472155 LECT2O14960 151 aa10.11□□□□□ -0.79
UBXN11-213ENST00000472155 ESRGQ1W209 222 aa10.1□□□□□ -0.79
UBXN11-213ENST00000472155 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
UBXN11-213ENST00000472155 COL7A1Q02388 2944 aa10.09□□□□□ -0.79
UBXN11-213ENST00000472155 C15orf53Q8NAA6 179 aa10.09□□□□□ -0.79
UBXN11-213ENST00000472155 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
UBXN11-213ENST00000472155 B5MCH6 92 aa10.08□□□□□ -0.8
UBXN11-213ENST00000472155 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
UBXN11-213ENST00000472155 NHLRC4P0CG21 123 aaPredicted RBP10.06□□□□□ -0.8
UBXN11-213ENST00000472155 CXCL5P42830 114 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms