RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 J3QL48 77 aa5.72□□□□□ -1.49
SYN3-211ENST00000472027 PMCHL1Q16048 86 aa5.72□□□□□ -1.49
SYN3-211ENST00000472027 Q6ZRP5 223 aa5.72□□□□□ -1.49
SYN3-211ENST00000472027 Q8IZM0 81 aa5.72□□□□□ -1.49
SYN3-211ENST00000472027 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
SYN3-211ENST00000472027 HBDP02042 147 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 NDUFA6P56556 154 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 CKS1BP61024 79 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
SYN3-211ENST00000472027 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
SYN3-211ENST00000472027 IGLV5-45A0A087WSX0 123 aa5.7□□□□□ -1.5
SYN3-211ENST00000472027 SMIM1B2RUZ4 78 aa5.7□□□□□ -1.5
SYN3-211ENST00000472027 NDUFC2-KCTD14E9PQ53 114 aa5.7□□□□□ -1.5
SYN3-211ENST00000472027 OXTP01178 125 aa5.7□□□□□ -1.5
SYN3-211ENST00000472027 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
SYN3-211ENST00000472027 FAM168BA1KXE4 195 aa5.69□□□□□ -1.5
SYN3-211ENST00000472027 ATP5LO75964 103 aa5.69□□□□□ -1.5
SYN3-211ENST00000472027 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
SYN3-211ENST00000472027 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
SYN3-211ENST00000472027 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
SYN3-211ENST00000472027 CHCHD1Q96BP2 118 aaKnown RBP5.69□□□□□ -1.5
SYN3-211ENST00000472027 F8VRH5 84 aa5.68□□□□□ -1.5
SYN3-211ENST00000472027 TRGC2P03986 189 aa5.68□□□□□ -1.5
SYN3-211ENST00000472027 IGLC3P0DOY3 106 aa5.68□□□□□ -1.5
SYN3-211ENST00000472027 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
SYN3-211ENST00000472027 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
SYN3-211ENST00000472027 H3BRM9 83 aa5.67□□□□□ -1.5
SYN3-211ENST00000472027 CXCL5P42830 114 aa5.67□□□□□ -1.5
SYN3-211ENST00000472027 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
SYN3-211ENST00000472027 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
SYN3-211ENST00000472027 BAGE3Q86Y29 109 aa5.67□□□□□ -1.5
SYN3-211ENST00000472027 KRTAP7-1Q8IUC3 87 aa5.67□□□□□ -1.5
SYN3-211ENST00000472027 LRP1Q07954 4544 aaKnown RBP5.66□□□□□ -1.5
SYN3-211ENST00000472027 COLCA2A8K830 154 aa5.66□□□□□ -1.5
SYN3-211ENST00000472027 ZNF22P17026 224 aaPredicted RBP5.66□□□□□ -1.5
SYN3-211ENST00000472027 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
SYN3-211ENST00000472027 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
SYN3-211ENST00000472027 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
SYN3-211ENST00000472027 HERC1Q15751 4861 aa5.66□□□□□ -1.5
SYN3-211ENST00000472027 HSBP1O75506 76 aa5.65□□□□□ -1.5
SYN3-211ENST00000472027 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.5
SYN3-211ENST00000472027 FAM19A2Q8N3H0 131 aa5.65□□□□□ -1.5
SYN3-211ENST00000472027 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
SYN3-211ENST00000472027 CHTOPQ9Y3Y2 248 aaKnown RBP5.65□□□□□ -1.5
SYN3-211ENST00000472027 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
SYN3-211ENST00000472027 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
SYN3-211ENST00000472027 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
SYN3-211ENST00000472027 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
SYN3-211ENST00000472027 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
SYN3-211ENST00000472027 TRAV12-1A0A0B4J245 112 aa5.63□□□□□ -1.51
SYN3-211ENST00000472027 M0QXV9 152 aa5.63□□□□□ -1.51
SYN3-211ENST00000472027 C1orf137Q5JT78 98 aa5.63□□□□□ -1.51
SYN3-211ENST00000472027 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
SYN3-211ENST00000472027 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
SYN3-211ENST00000472027 NUPR1O60356 82 aa5.62□□□□□ -1.51
SYN3-211ENST00000472027 SERF1AO75920 110 aa5.62□□□□□ -1.51
SYN3-211ENST00000472027 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
SYN3-211ENST00000472027 LINC00310P59036 64 aa5.62□□□□□ -1.51
SYN3-211ENST00000472027 UBE2BP63146 152 aa5.62□□□□□ -1.51
SYN3-211ENST00000472027 SCO1O75880 301 aa5.61□□□□□ -1.51
SYN3-211ENST00000472027 LEPROTL1O95214 131 aa5.61□□□□□ -1.51
SYN3-211ENST00000472027 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
SYN3-211ENST00000472027 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
SYN3-211ENST00000472027 TMEM223A0PJW6 202 aa5.6□□□□□ -1.51
SYN3-211ENST00000472027 PFN2P35080 140 aa5.6□□□□□ -1.51
SYN3-211ENST00000472027 SMCPP49901 116 aaPredicted RBP5.6□□□□□ -1.51
SYN3-211ENST00000472027 REG3GQ6UW15 175 aa5.6□□□□□ -1.51
SYN3-211ENST00000472027 H0Y8G0 127 aa5.59□□□□□ -1.51
SYN3-211ENST00000472027 FABP4P15090 132 aa5.59□□□□□ -1.51
SYN3-211ENST00000472027 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
SYN3-211ENST00000472027 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
SYN3-211ENST00000472027 ERG28Q9UKR5 140 aa5.59□□□□□ -1.51
SYN3-211ENST00000472027 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.51
SYN3-211ENST00000472027 COX17Q14061 63 aa5.58□□□□□ -1.52
SYN3-211ENST00000472027 ODF1Q14990 250 aa5.58□□□□□ -1.52
SYN3-211ENST00000472027 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
SYN3-211ENST00000472027 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
SYN3-211ENST00000472027 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
SYN3-211ENST00000472027 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
SYN3-211ENST00000472027 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
SYN3-211ENST00000472027 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
SYN3-211ENST00000472027 IGLV5-37A0A075B6J1 123 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 DIRC1Q969H9 104 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
SYN3-211ENST00000472027 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms