RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LECT2O14960 151 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 CRPP02741 224 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-211ENST00000471260 UBE2D1P51668 147 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 Q6ZSA8 131 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 VPS25Q9BRG1 176 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
HMGN1-211ENST00000471260 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-211ENST00000471260 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
HMGN1-211ENST00000471260 ENHOQ6UWT2 76 aa8.87□□□□□ -0.99
HMGN1-211ENST00000471260 CHCHD5Q9BSY4 110 aa8.87□□□□□ -0.99
HMGN1-211ENST00000471260 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
HMGN1-211ENST00000471260 FAT1Q14517 4588 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 J3QR89 54 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 K7ERJ3 54 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
HMGN1-211ENST00000471260 PCP4P48539 62 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 MIAQ16674 131 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 NTM-AS1Q6ZSK4 140 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
HMGN1-211ENST00000471260 VPS13BQ7Z7G8 4022 aa8.85□□□□□ -0.99
HMGN1-211ENST00000471260 LEPROTO15243 131 aa8.85□□□□□ -0.99
HMGN1-211ENST00000471260 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
HMGN1-211ENST00000471260 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
HMGN1-211ENST00000471260 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
HMGN1-211ENST00000471260 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
HMGN1-211ENST00000471260 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
HMGN1-211ENST00000471260 HAMPP81172 84 aa8.84□□□□□ -0.99
HMGN1-211ENST00000471260 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
HMGN1-211ENST00000471260 TMEM223A0PJW6 202 aa8.83□□□□□ -1
HMGN1-211ENST00000471260 J3QQQ9 107 aa8.83□□□□□ -1
HMGN1-211ENST00000471260 SRSF9Q13242 221 aaKnown RBP eCLIP8.83□□□□□ -1
HMGN1-211ENST00000471260 TMEM170BQ5T4T1 132 aa8.83□□□□□ -1
HMGN1-211ENST00000471260 NAA38Q9BRA0 125 aaKnown RBP8.83□□□□□ -1
HMGN1-211ENST00000471260 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
HMGN1-211ENST00000471260 TMEM238C9JI98 176 aa8.82□□□□□ -1
HMGN1-211ENST00000471260 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
HMGN1-211ENST00000471260 COTL1Q14019 142 aa8.82□□□□□ -1
HMGN1-211ENST00000471260 AMELXQ99217 191 aa8.82□□□□□ -1
HMGN1-211ENST00000471260 TRBV20-1A0A075B6N2 111 aa8.81□□□□□ -1
HMGN1-211ENST00000471260 A0A1B0GUV1 79 aa8.81□□□□□ -1
HMGN1-211ENST00000471260 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
HMGN1-211ENST00000471260 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
HMGN1-211ENST00000471260 GAGE6Q13070 117 aa8.81□□□□□ -1
HMGN1-211ENST00000471260 VCX2Q9H322 139 aa8.81□□□□□ -1
HMGN1-211ENST00000471260 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
HMGN1-211ENST00000471260 DGAT2L7PQ6IED9 249 aa8.8□□□□□ -1
HMGN1-211ENST00000471260 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
HMGN1-211ENST00000471260 TMEM243Q9BU79 118 aa8.8□□□□□ -1
HMGN1-211ENST00000471260 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
HMGN1-211ENST00000471260 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
HMGN1-211ENST00000471260 A0A0B4J2C4 111 aa8.79□□□□□ -1
HMGN1-211ENST00000471260 USP17L23D6RBM5 183 aa8.79□□□□□ -1
HMGN1-211ENST00000471260 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
HMGN1-211ENST00000471260 REG3AQ06141 175 aa8.79□□□□□ -1
HMGN1-211ENST00000471260 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
HMGN1-211ENST00000471260 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 M0QXV9 152 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 TSPAN13O95857 204 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 LINC01620Q4KN68 170 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 SCXQ7RTU7 201 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 PRO0461Q9UI25 63 aa8.78□□□□□ -1
HMGN1-211ENST00000471260 UBE2L6O14933 153 aa8.77□□□□□ -1.01
HMGN1-211ENST00000471260 H3BMG7 143 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 TIMM17BO60830 172 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 SCGB1A1P11684 91 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 CLPSL2Q6UWE3 100 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 SPANXDQ9BXN6 97 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
HMGN1-211ENST00000471260 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-211ENST00000471260 IGHV1-58A0A0C4DH39 117 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 H7C423 109 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 C9orf163Q8N9P6 203 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 CIRBP-AS1Q8TBR5 109 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 DEFB104AQ8WTQ1 72 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 PRO1854Q9UHT4 67 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
HMGN1-211ENST00000471260 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-211ENST00000471260 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
HMGN1-211ENST00000471260 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
HMGN1-211ENST00000471260 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
HMGN1-211ENST00000471260 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
HMGN1-211ENST00000471260 A0A0J9YXV3 536 aa8.73□□□□□ -1.01
HMGN1-211ENST00000471260 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
HMGN1-211ENST00000471260 CFC1BP0CG36 223 aa8.73□□□□□ -1.01
HMGN1-211ENST00000471260 CFC1P0CG37 223 aa8.73□□□□□ -1.01
HMGN1-211ENST00000471260 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
HMGN1-211ENST00000471260 CSDC2Q9Y534 153 aaKnown RBP8.73□□□□□ -1.01
HMGN1-211ENST00000471260 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
HMGN1-211ENST00000471260 IGLV10-54A0A075B6I4 117 aa8.72□□□□□ -1.01
HMGN1-211ENST00000471260 APOMO95445 188 aa8.72□□□□□ -1.01
HMGN1-211ENST00000471260 IFITM1P13164 125 aa8.72□□□□□ -1.01
HMGN1-211ENST00000471260 CNBPP62633 177 aaKnown RBP8.72□□□□□ -1.01
HMGN1-211ENST00000471260 COPS9Q8WXC6 57 aa8.72□□□□□ -1.01
HMGN1-211ENST00000471260 LINC01600Q96MT4 127 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms