RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ALMS1Q8TCU4 4167 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 IGLV4-69A0A075B6H9 119 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 NBDYA0A0U1RRE5 68 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 C11orf86A6NJI1 115 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 IBA57-AS1B1ANH7 110 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 F8VRH5 84 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 SPINK8P0C7L1 97 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 JOSD1Q15040 202 aaPredicted RBP2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 MAJINQ3KP22 176 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 PYY3Q5JQD4 70 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC00242Q5T6M2 205 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC01545Q5VT33 79 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 NOTCH2NLQ7Z3S9 236 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC00469Q8N7U9 141 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 CHCHD10Q8WYQ3 142 aaPredicted RBP2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 DNAH1Q9P2D7 4330 aa2.72□□□□□ -1.97
TMEM39A-204ENST00000468545 STAB2Q8WWQ8 2551 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 TRAV8-4A0A0B4J246 113 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 TINCRA0A1B0GVN0 87 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 HSBP1L1C9JCN9 74 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 H3BRM9 83 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 PSCAO43653 123 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 IGLC3P0DOY3 106 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 HERVK_113P63121 156 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 SEC11AP67812 179 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 MIAQ16674 131 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 CD164L2Q6UWJ8 174 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 C10orf126Q8N4M7 172 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 RMI2Q96E14 147 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 TOMM7Q9P0U1 55 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 CDKN2A-AS1Q9UH64 79 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 TGP01266 2768 aa2.71□□□□□ -1.98
TMEM39A-204ENST00000468545 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 TMEM223A0PJW6 202 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 COX7A2LO14548 114 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 LECT2O14960 151 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 CDK2AP2O75956 126 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 PLNP26678 52 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 NMUP48645 174 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 HERVK_113P61574 105 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 S100A12P80511 92 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 HIGD2BQ4VC39 106 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 SPATA45Q537H7 98 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 TTC32Q5I0X7 151 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 LINC00526Q96FQ7 95 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 VAMP8Q9BV40 100 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 PRO1933Q9H354 126 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 PRR34Q9NV39 138 aa2.7□□□□□ -1.98
TMEM39A-204ENST00000468545 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 HYDINQ4G0P3 5121 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 A0A087X002 238 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 IGHV3OR16-9A0A0B4J2B5 98 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 LEPROTO15243 131 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 APOMO95445 188 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 LGALS3P17931 250 aaKnown RBP2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 C6orf226Q5I0X4 101 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 ADAMTSL4-AS1Q5T5F5 129 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 C1orf134Q5TEV5 83 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 FAM19A3Q7Z5A8 133 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 C6orf223Q8N319 242 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 COX7B2Q8TF08 81 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 ORAOV1Q8WV07 137 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 ZNF625Q96I27 306 aaPredicted RBP2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 C14orf144Q96I85 54 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 C12orf57Q99622 126 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 TTTY13Q9BZ97 58 aa2.69□□□□□ -1.98
TMEM39A-204ENST00000468545 DNAH6Q9C0G6 4158 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 A0A087WZ39 114 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 IGKV2D-26A0A0A0MRZ7 120 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 IGHV1-58A0A0C4DH39 117 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 A0A0U1RRA0 63 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 E9PLD3 99 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 J3QQQ9 107 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 K7EP13 123 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 SMIM6P0DI80 62 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 CKS1BP61024 79 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 KRTAP26-1Q6PEX3 210 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 LINC00518Q8N0U6 118 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 PLEKHB2Q96CS7 222 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 LYSTQ99698 3801 aa2.68□□□□□ -1.98
TMEM39A-204ENST00000468545 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 LCE6AA0A183 80 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 PCP4L1A6NKN8 68 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 ZNF815PA8K554 130 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 FUSP35637 526 aaKnown RBP eCLIP2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 TSPEAR-AS2P59090 65 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 WFDC2Q14508 124 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 MEIG1Q5JSS6 88 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 C2orf82Q6UX34 121 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 UNQ6190/PRO20217Q6UXQ8 127 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms