RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CHTF8P0CG12 524 aa8.91□□□□□ -0.98
UBA3-209ENST00000466763 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
UBA3-209ENST00000466763 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
UBA3-209ENST00000466763 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
UBA3-209ENST00000466763 HSPB8Q9UJY1 196 aa8.91□□□□□ -0.98
UBA3-209ENST00000466763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
UBA3-209ENST00000466763 F8WDY8 70 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 CKS1BP61024 79 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 KRTAP9-9Q9BYP9 154 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 KRTAP9-4Q9BYQ2 154 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
UBA3-209ENST00000466763 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 LOC107984640A0A0U1RRK4 108 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 C11orf86A6NJI1 115 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 PANO1I0J062 215 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 ZNF22P17026 224 aaPredicted RBP8.89□□□□□ -0.99
UBA3-209ENST00000466763 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 MAJINQ3KP22 176 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 C10orf25Q5T742 122 aa8.89□□□□□ -0.99
UBA3-209ENST00000466763 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
UBA3-209ENST00000466763 Q8IZM0 81 aa8.88□□□□□ -0.99
UBA3-209ENST00000466763 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
UBA3-209ENST00000466763 COX7B2Q8TF08 81 aa8.88□□□□□ -0.99
UBA3-209ENST00000466763 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
UBA3-209ENST00000466763 RYR1P21817 5038 aa8.87□□□□□ -0.99
UBA3-209ENST00000466763 A0A096LNI7 61 aa8.87□□□□□ -0.99
UBA3-209ENST00000466763 RNF151Q2KHN1 245 aa8.87□□□□□ -0.99
UBA3-209ENST00000466763 C6orf48Q9UBA6 75 aa8.87□□□□□ -0.99
UBA3-209ENST00000466763 F8VRH5 84 aa8.86□□□□□ -0.99
UBA3-209ENST00000466763 Q8N1X5 172 aa8.86□□□□□ -0.99
UBA3-209ENST00000466763 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
UBA3-209ENST00000466763 MAP1LC3CQ9BXW4 147 aa8.86□□□□□ -0.99
UBA3-209ENST00000466763 APOBP04114 4563 aaKnown RBP8.85□□□□□ -0.99
UBA3-209ENST00000466763 A0A087WYN8 130 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 TRBV30A0A0K0K1B3 111 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 ODF1Q14990 250 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 C9orf116Q5BN46 136 aaPredicted RBP8.84□□□□□ -0.99
UBA3-209ENST00000466763 KRTAP19-1Q8IUB9 90 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 STPG4Q8N801 248 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
UBA3-209ENST00000466763 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
UBA3-209ENST00000466763 EPM2AB3EWF7 344 aa8.83□□□□□ -1
UBA3-209ENST00000466763 CXCL5P42830 114 aa8.83□□□□□ -1
UBA3-209ENST00000466763 PTTG1IPP53801 180 aa8.83□□□□□ -1
UBA3-209ENST00000466763 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
UBA3-209ENST00000466763 GAGE2EQ4V326 116 aa8.83□□□□□ -1
UBA3-209ENST00000466763 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
UBA3-209ENST00000466763 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
UBA3-209ENST00000466763 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
UBA3-209ENST00000466763 Q5VSD8 79 aa8.81□□□□□ -1
UBA3-209ENST00000466763 Q6ZRP5 223 aa8.81□□□□□ -1
UBA3-209ENST00000466763 HERC2O95714 4834 aa8.81□□□□□ -1
UBA3-209ENST00000466763 HSPG2P98160 4391 aa8.8□□□□□ -1
UBA3-209ENST00000466763 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
UBA3-209ENST00000466763 TMEM223A0PJW6 202 aa8.8□□□□□ -1
UBA3-209ENST00000466763 DPM2O94777 84 aa8.8□□□□□ -1
UBA3-209ENST00000466763 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
UBA3-209ENST00000466763 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
UBA3-209ENST00000466763 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
UBA3-209ENST00000466763 S100A6P06703 90 aa8.79□□□□□ -1
UBA3-209ENST00000466763 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
UBA3-209ENST00000466763 PLNP26678 52 aa8.79□□□□□ -1
UBA3-209ENST00000466763 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
UBA3-209ENST00000466763 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
UBA3-209ENST00000466763 IGKCP01834 107 aa8.78□□□□□ -1
UBA3-209ENST00000466763 KRTDAPP60985 99 aa8.78□□□□□ -1
UBA3-209ENST00000466763 ZNF625Q96I27 306 aaPredicted RBP8.78□□□□□ -1
UBA3-209ENST00000466763 A0A1W2PNN7 141 aa8.77□□□□□ -1.01
UBA3-209ENST00000466763 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
UBA3-209ENST00000466763 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 S100A2P29034 98 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 PFN2P35080 140 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 HERVK_113P61574 105 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
UBA3-209ENST00000466763 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
UBA3-209ENST00000466763 FAM19A5Q7Z5A7 132 aaPredicted RBP8.75□□□□□ -1.01
UBA3-209ENST00000466763 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
UBA3-209ENST00000466763 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
UBA3-209ENST00000466763 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
UBA3-209ENST00000466763 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
UBA3-209ENST00000466763 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
UBA3-209ENST00000466763 HIST3H2BBQ8N257 126 aa8.73□□□□□ -1.01
UBA3-209ENST00000466763 PLEKHB2Q96CS7 222 aa8.73□□□□□ -1.01
UBA3-209ENST00000466763 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
UBA3-209ENST00000466763 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
UBA3-209ENST00000466763 C20orf202A1L168 122 aa8.72□□□□□ -1.01
UBA3-209ENST00000466763 LEPROTO15243 131 aa8.72□□□□□ -1.01
UBA3-209ENST00000466763 INAFM2P0DMQ5 153 aa8.71□□□□□ -1.02
UBA3-209ENST00000466763 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
UBA3-209ENST00000466763 LINC00158P58513 81 aa8.71□□□□□ -1.02
UBA3-209ENST00000466763 SNRPEP62304 92 aaKnown RBP8.71□□□□□ -1.02
UBA3-209ENST00000466763 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms