RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
PMF1-204ENST00000466489 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
PMF1-204ENST00000466489 LINC01561Q8N1V8 128 aa7.03□□□□□ -1.28
PMF1-204ENST00000466489 TMEM243Q9BU79 118 aa7.03□□□□□ -1.28
PMF1-204ENST00000466489 F5H768 121 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 H3BQ85 93 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 K7EQD1 137 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 Q6ZTI0 123 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 LINC00612Q8N6U2 182 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 LITAFQ99732 161 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 MUC4Q99102 2169 aa7.02□□□□□ -1.29
PMF1-204ENST00000466489 COX7A2LO14548 114 aa7.01□□□□□ -1.29
PMF1-204ENST00000466489 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
PMF1-204ENST00000466489 TRIAP1O43715 76 aa7□□□□□ -1.29
PMF1-204ENST00000466489 GHRHP01286 108 aa7□□□□□ -1.29
PMF1-204ENST00000466489 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
PMF1-204ENST00000466489 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
PMF1-204ENST00000466489 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 IBA57-AS1B1ANH7 110 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 H7C2G1 150 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 GAGE5Q13069 117 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 GAGE6Q13070 117 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
PMF1-204ENST00000466489 OPRPNQ99935 248 aaPredicted RBP6.99□□□□□ -1.29
PMF1-204ENST00000466489 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
PMF1-204ENST00000466489 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
PMF1-204ENST00000466489 DAND5Q8N907 189 aa6.98□□□□□ -1.29
PMF1-204ENST00000466489 Q9H8V8 135 aa6.98□□□□□ -1.29
PMF1-204ENST00000466489 A0A1B0GX51 115 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 GAGE12JA6NER3 117 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 H3BNG1 76 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 DNAL4O96015 105 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 GAGE4Q13068 117 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 PRO0255Q9UI72 69 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 NACAE9PAV3 2078 aa6.97□□□□□ -1.29
PMF1-204ENST00000466489 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 IGHV3-73A0A0B4J1V6 119 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 PAX4O43316 350 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 CRPP02741 224 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 CXCL5P42830 114 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 XGP55808 180 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 UBE2DNLQ8IWF7 75 aa6.96□□□□□ -1.3
PMF1-204ENST00000466489 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
PMF1-204ENST00000466489 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
PMF1-204ENST00000466489 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
PMF1-204ENST00000466489 COX17Q14061 63 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 FAM104AQ969W3 186 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
PMF1-204ENST00000466489 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
PMF1-204ENST00000466489 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
PMF1-204ENST00000466489 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
PMF1-204ENST00000466489 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
PMF1-204ENST00000466489 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
PMF1-204ENST00000466489 FHL2Q14192 279 aa6.94□□□□□ -1.3
PMF1-204ENST00000466489 TRBV6-8A0A0A6YYG3 113 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 LY6G6CO95867 125 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 MT-ATP8P03928 68 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 CCL18P55774 89 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 SS18Q15532 418 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 TMEM126AQ9H061 195 aa6.93□□□□□ -1.3
PMF1-204ENST00000466489 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
PMF1-204ENST00000466489 A0A087WZ39 114 aa6.92□□□□□ -1.3
PMF1-204ENST00000466489 TRAV13-1A0A0B4J241 112 aa6.92□□□□□ -1.3
PMF1-204ENST00000466489 LCE6AA0A183 80 aa6.92□□□□□ -1.3
PMF1-204ENST00000466489 Q6ZSN1 163 aa6.92□□□□□ -1.3
PMF1-204ENST00000466489 TEX49A0A1B0GTD5 131 aa6.91□□□□□ -1.3
PMF1-204ENST00000466489 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
PMF1-204ENST00000466489 GYPEP15421 78 aa6.91□□□□□ -1.3
PMF1-204ENST00000466489 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.3
PMF1-204ENST00000466489 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
PMF1-204ENST00000466489 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
PMF1-204ENST00000466489 NDUFC2O95298 119 aa6.89□□□□□ -1.31
PMF1-204ENST00000466489 LINC00158P58513 81 aa6.89□□□□□ -1.31
PMF1-204ENST00000466489 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
PMF1-204ENST00000466489 CHCHD5Q9BSY4 110 aa6.89□□□□□ -1.31
PMF1-204ENST00000466489 A0A096LPF7 62 aa6.88□□□□□ -1.31
PMF1-204ENST00000466489 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
PMF1-204ENST00000466489 IGHV3-38A0A0C4DH36 116 aa6.88□□□□□ -1.31
PMF1-204ENST00000466489 Q8IZM0 81 aa6.88□□□□□ -1.31
PMF1-204ENST00000466489 PDE6GP18545 87 aa6.87□□□□□ -1.31
PMF1-204ENST00000466489 MALP21145 153 aa6.87□□□□□ -1.31
PMF1-204ENST00000466489 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
PMF1-204ENST00000466489 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
PMF1-204ENST00000466489 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
PMF1-204ENST00000466489 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
PMF1-204ENST00000466489 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
PMF1-204ENST00000466489 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
PMF1-204ENST00000466489 COX6A2Q02221 97 aa6.86□□□□□ -1.31
PMF1-204ENST00000466489 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
PMF1-204ENST00000466489 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms