RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 Q9HAA7 133 aa13.46□□□□□ -0.26
LIMS2-212ENST00000466410 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
LIMS2-212ENST00000466410 X6R8D5 127 aa13.45□□□□□ -0.26
LIMS2-212ENST00000466410 XCL1P47992 114 aa13.45□□□□□ -0.26
LIMS2-212ENST00000466410 SMIM11BQ8TCY0 68 aa13.45□□□□□ -0.26
LIMS2-212ENST00000466410 A0A096LPF7 62 aa13.44□□□□□ -0.26
LIMS2-212ENST00000466410 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
LIMS2-212ENST00000466410 C6orf226Q5I0X4 101 aa13.42□□□□□ -0.26
LIMS2-212ENST00000466410 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
LIMS2-212ENST00000466410 PRO0255Q9UI72 69 aa13.41□□□□□ -0.26
LIMS2-212ENST00000466410 A0A087WYN8 130 aa13.4□□□□□ -0.26
LIMS2-212ENST00000466410 A0A1B0GUV1 79 aa13.4□□□□□ -0.26
LIMS2-212ENST00000466410 PAX4O43316 350 aa13.4□□□□□ -0.26
LIMS2-212ENST00000466410 ACYP1P07311 99 aa13.4□□□□□ -0.26
LIMS2-212ENST00000466410 SS18Q15532 418 aa13.39□□□□□ -0.27
LIMS2-212ENST00000466410 LY6G6DO95868 133 aa13.39□□□□□ -0.27
LIMS2-212ENST00000466410 SMCR5Q8TEV8 140 aa13.39□□□□□ -0.27
LIMS2-212ENST00000466410 MALP21145 153 aa13.38□□□□□ -0.27
LIMS2-212ENST00000466410 NSD1Q96L73 2696 aaPredicted RBP13.37□□□□□ -0.27
LIMS2-212ENST00000466410 DEFB4AO15263 64 aa13.37□□□□□ -0.27
LIMS2-212ENST00000466410 TRBV7-7A0A0K0K1E9 115 aa13.36□□□□□ -0.27
LIMS2-212ENST00000466410 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
LIMS2-212ENST00000466410 ATP5G1P05496 136 aa13.36□□□□□ -0.27
LIMS2-212ENST00000466410 OR13C6PQ8NH95 151 aa13.36□□□□□ -0.27
LIMS2-212ENST00000466410 DNAL4O96015 105 aa13.35□□□□□ -0.27
LIMS2-212ENST00000466410 Q8IZM0 81 aa13.35□□□□□ -0.27
LIMS2-212ENST00000466410 H0YGX0 51 aa13.34□□□□□ -0.27
LIMS2-212ENST00000466410 Q8N3U1 123 aa13.34□□□□□ -0.27
LIMS2-212ENST00000466410 CCDC179H3BU77 68 aa13.33□□□□□ -0.27
LIMS2-212ENST00000466410 DEFB135Q30KP9 77 aa13.33□□□□□ -0.27
LIMS2-212ENST00000466410 C9orf129Q5T035 196 aaKnown RBP13.33□□□□□ -0.27
LIMS2-212ENST00000466410 LINC00269Q8N2A0 174 aa13.33□□□□□ -0.27
LIMS2-212ENST00000466410 HIVEP1P15822 2718 aa13.33□□□□□ -0.28
LIMS2-212ENST00000466410 B5MCH6 92 aa13.33□□□□□ -0.28
LIMS2-212ENST00000466410 LECT2O14960 151 aa13.32□□□□□ -0.28
LIMS2-212ENST00000466410 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
LIMS2-212ENST00000466410 LYRM9A8MSI8 78 aa13.31□□□□□ -0.28
LIMS2-212ENST00000466410 GAGE2AQ6NT46 116 aa13.31□□□□□ -0.28
LIMS2-212ENST00000466410 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
LIMS2-212ENST00000466410 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
LIMS2-212ENST00000466410 IGLV10-54A0A075B6I4 117 aa13.3□□□□□ -0.28
LIMS2-212ENST00000466410 LINC00643Q86TS7 51 aa13.3□□□□□ -0.28
LIMS2-212ENST00000466410 INAFM1C9JVW0 142 aa13.29□□□□□ -0.28
LIMS2-212ENST00000466410 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
LIMS2-212ENST00000466410 KIAA0087Q14695 138 aa13.29□□□□□ -0.28
LIMS2-212ENST00000466410 C9orf66Q5T8R8 295 aa13.28□□□□□ -0.28
LIMS2-212ENST00000466410 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
LIMS2-212ENST00000466410 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
LIMS2-212ENST00000466410 CD164L2Q6UWJ8 174 aa13.28□□□□□ -0.28
LIMS2-212ENST00000466410 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-212ENST00000466410 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.28
LIMS2-212ENST00000466410 SLPIP03973 132 aa13.27□□□□□ -0.28
LIMS2-212ENST00000466410 IMUPQ9GZP8 106 aa13.27□□□□□ -0.29
LIMS2-212ENST00000466410 C14orf132Q9NPU4 83 aa13.27□□□□□ -0.29
LIMS2-212ENST00000466410 SS18L2Q9UHA2 77 aa13.27□□□□□ -0.29
LIMS2-212ENST00000466410 REG3AQ06141 175 aa13.26□□□□□ -0.29
LIMS2-212ENST00000466410 CELA1Q9UNI1 258 aa13.26□□□□□ -0.29
LIMS2-212ENST00000466410 FAM236AA0A1B0GUQ0 79 aa13.25□□□□□ -0.29
LIMS2-212ENST00000466410 FAM236BA0A1B0GV22 79 aa13.25□□□□□ -0.29
LIMS2-212ENST00000466410 DAD1P61803 113 aa13.25□□□□□ -0.29
LIMS2-212ENST00000466410 C9orf116Q5BN46 136 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-212ENST00000466410 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
LIMS2-212ENST00000466410 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
LIMS2-212ENST00000466410 OBSCN-AS1Q96MR7 158 aa13.24□□□□□ -0.29
LIMS2-212ENST00000466410 NCR3O14931 201 aa13.22□□□□□ -0.29
LIMS2-212ENST00000466410 APOC4P55056 127 aa13.22□□□□□ -0.29
LIMS2-212ENST00000466410 CXCL5P42830 114 aa13.21□□□□□ -0.3
LIMS2-212ENST00000466410 COX17Q14061 63 aa13.21□□□□□ -0.3
LIMS2-212ENST00000466410 Q8NAQ8 132 aa13.21□□□□□ -0.3
LIMS2-212ENST00000466410 KLK5Q9Y337 293 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-212ENST00000466410 ATRQ13535 2644 aa13.19□□□□□ -0.3
LIMS2-212ENST00000466410 NDUFC2O95298 119 aa13.19□□□□□ -0.3
LIMS2-212ENST00000466410 HTN3P15516 51 aa13.19□□□□□ -0.3
LIMS2-212ENST00000466410 Q8NDZ9 215 aa13.19□□□□□ -0.3
LIMS2-212ENST00000466410 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
LIMS2-212ENST00000466410 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
LIMS2-212ENST00000466410 TMEM126AQ9H061 195 aa13.17□□□□□ -0.3
LIMS2-212ENST00000466410 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
LIMS2-212ENST00000466410 LINC00526Q96FQ7 95 aa13.16□□□□□ -0.3
LIMS2-212ENST00000466410 MIFP14174 115 aa13.16□□□□□ -0.3
LIMS2-212ENST00000466410 LINC00846Q9NV44 126 aa13.16□□□□□ -0.3
LIMS2-212ENST00000466410 Q8N814 137 aa13.15□□□□□ -0.3
LIMS2-212ENST00000466410 LINC00167Q96N53 147 aa13.15□□□□□ -0.3
LIMS2-212ENST00000466410 UNQ6190/PRO20217Q6UXQ8 127 aa13.15□□□□□ -0.3
LIMS2-212ENST00000466410 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
LIMS2-212ENST00000466410 TEP1Q99973 2627 aaKnown RBP13.14□□□□□ -0.31
LIMS2-212ENST00000466410 SPART-AS1P0CW21 52 aa13.14□□□□□ -0.31
LIMS2-212ENST00000466410 LELP1Q5T871 98 aa13.13□□□□□ -0.31
LIMS2-212ENST00000466410 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
LIMS2-212ENST00000466410 KLK12Q9UKR0 248 aa13.12□□□□□ -0.31
LIMS2-212ENST00000466410 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
LIMS2-212ENST00000466410 C6orf99Q4VX62 202 aa13.12□□□□□ -0.31
LIMS2-212ENST00000466410 A0A1B0GX51 115 aa13.11□□□□□ -0.31
LIMS2-212ENST00000466410 SVIPQ8NHG7 77 aa13.1□□□□□ -0.31
LIMS2-212ENST00000466410 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
LIMS2-212ENST00000466410 IGHV4-30-4P0DP06 118 aa13.1□□□□□ -0.31
LIMS2-212ENST00000466410 C3orf56Q8N813 242 aa13.1□□□□□ -0.31
LIMS2-212ENST00000466410 IGKV3D-7A0A0C4DH55 119 aa13.09□□□□□ -0.31
LIMS2-212ENST00000466410 PRR34Q9NV39 138 aa13.09□□□□□ -0.31
LIMS2-212ENST00000466410 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms