RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
LIMD1-203ENST00000465039 PLAC8Q9NZF1 115 aa8.74□□□□□ -1.01
LIMD1-203ENST00000465039 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
LIMD1-203ENST00000465039 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
LIMD1-203ENST00000465039 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-203ENST00000465039 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
LIMD1-203ENST00000465039 A0A096LNI7 61 aa8.72□□□□□ -1.01
LIMD1-203ENST00000465039 C11orf86A6NJI1 115 aa8.72□□□□□ -1.01
LIMD1-203ENST00000465039 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
LIMD1-203ENST00000465039 COX7B2Q8TF08 81 aa8.72□□□□□ -1.01
LIMD1-203ENST00000465039 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
LIMD1-203ENST00000465039 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 PANO1I0J062 215 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 PLNP26678 52 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 ODF1Q14990 250 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 TOMM7Q9P0U1 55 aa8.71□□□□□ -1.02
LIMD1-203ENST00000465039 A0A087WYN8 130 aa8.7□□□□□ -1.02
LIMD1-203ENST00000465039 NUPR1O60356 82 aa8.7□□□□□ -1.02
LIMD1-203ENST00000465039 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
LIMD1-203ENST00000465039 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
LIMD1-203ENST00000465039 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
LIMD1-203ENST00000465039 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 Q5VSD8 79 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 FAT1Q14517 4588 aa8.69□□□□□ -1.02
LIMD1-203ENST00000465039 HAMPP81172 84 aa8.68□□□□□ -1.02
LIMD1-203ENST00000465039 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
LIMD1-203ENST00000465039 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
LIMD1-203ENST00000465039 STPG4Q8N801 248 aa8.67□□□□□ -1.02
LIMD1-203ENST00000465039 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
LIMD1-203ENST00000465039 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
LIMD1-203ENST00000465039 FABP4P15090 132 aa8.66□□□□□ -1.02
LIMD1-203ENST00000465039 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
LIMD1-203ENST00000465039 Q6ZRP5 223 aa8.66□□□□□ -1.02
LIMD1-203ENST00000465039 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
LIMD1-203ENST00000465039 DPM2O94777 84 aa8.65□□□□□ -1.02
LIMD1-203ENST00000465039 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
LIMD1-203ENST00000465039 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
LIMD1-203ENST00000465039 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
LIMD1-203ENST00000465039 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.03
LIMD1-203ENST00000465039 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
LIMD1-203ENST00000465039 AKR1D1P51857 326 aa8.64□□□□□ -1.03
LIMD1-203ENST00000465039 COX17Q14061 63 aa8.64□□□□□ -1.03
LIMD1-203ENST00000465039 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
LIMD1-203ENST00000465039 H0Y8G0 127 aa8.62□□□□□ -1.03
LIMD1-203ENST00000465039 IGKCP01834 107 aa8.62□□□□□ -1.03
LIMD1-203ENST00000465039 HERVK_113P61574 105 aa8.62□□□□□ -1.03
LIMD1-203ENST00000465039 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-203ENST00000465039 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
LIMD1-203ENST00000465039 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-203ENST00000465039 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
LIMD1-203ENST00000465039 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
LIMD1-203ENST00000465039 HERV-K104P63124 156 aa8.61□□□□□ -1.03
LIMD1-203ENST00000465039 KRTAP4-5Q9BYR2 181 aa8.61□□□□□ -1.03
LIMD1-203ENST00000465039 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
LIMD1-203ENST00000465039 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-203ENST00000465039 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
LIMD1-203ENST00000465039 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
LIMD1-203ENST00000465039 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
LIMD1-203ENST00000465039 NMUP48645 174 aa8.59□□□□□ -1.03
LIMD1-203ENST00000465039 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
LIMD1-203ENST00000465039 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
LIMD1-203ENST00000465039 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
LIMD1-203ENST00000465039 C20orf202A1L168 122 aa8.58□□□□□ -1.04
LIMD1-203ENST00000465039 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
LIMD1-203ENST00000465039 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
LIMD1-203ENST00000465039 MYMXA0A1B0GTQ4 84 aa8.57□□□□□ -1.04
LIMD1-203ENST00000465039 LEPROTO15243 131 aa8.57□□□□□ -1.04
LIMD1-203ENST00000465039 S100A6P06703 90 aa8.57□□□□□ -1.04
LIMD1-203ENST00000465039 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
LIMD1-203ENST00000465039 E9PLD3 99 aa8.56□□□□□ -1.04
LIMD1-203ENST00000465039 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
LIMD1-203ENST00000465039 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
LIMD1-203ENST00000465039 J3QQQ9 107 aa8.55□□□□□ -1.04
LIMD1-203ENST00000465039 S100A2P29034 98 aa8.55□□□□□ -1.04
LIMD1-203ENST00000465039 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
LIMD1-203ENST00000465039 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
LIMD1-203ENST00000465039 PMCHL2Q9BQD1 86 aa8.55□□□□□ -1.04
LIMD1-203ENST00000465039 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
LIMD1-203ENST00000465039 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
LIMD1-203ENST00000465039 M0QXV9 152 aa8.54□□□□□ -1.04
LIMD1-203ENST00000465039 KRTDAPP60985 99 aa8.54□□□□□ -1.04
LIMD1-203ENST00000465039 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
LIMD1-203ENST00000465039 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
LIMD1-203ENST00000465039 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
LIMD1-203ENST00000465039 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
LIMD1-203ENST00000465039 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
LIMD1-203ENST00000465039 PFN2P35080 140 aa8.53□□□□□ -1.04
LIMD1-203ENST00000465039 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
LIMD1-203ENST00000465039 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
LIMD1-203ENST00000465039 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
LIMD1-203ENST00000465039 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
LIMD1-203ENST00000465039 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
LIMD1-203ENST00000465039 RPL24P83731 157 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms