RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 S100A8P05109 93 aa8.33□□□□□ -1.08
SMC1A-204ENST00000463684 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
SMC1A-204ENST00000463684 GAGE10A6NGK3 116 aa8.32□□□□□ -1.08
SMC1A-204ENST00000463684 F8VRH5 84 aa8.32□□□□□ -1.08
SMC1A-204ENST00000463684 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
SMC1A-204ENST00000463684 VCX2Q9H322 139 aa8.32□□□□□ -1.08
SMC1A-204ENST00000463684 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
SMC1A-204ENST00000463684 ALKAL2Q6UX46 152 aa8.3□□□□□ -1.08
SMC1A-204ENST00000463684 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
SMC1A-204ENST00000463684 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
SMC1A-204ENST00000463684 PNRC1Q12796 327 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-204ENST00000463684 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
SMC1A-204ENST00000463684 TMEM136Q6ZRR5 245 aa8.29□□□□□ -1.08
SMC1A-204ENST00000463684 ORMDL3Q8N138 153 aa8.29□□□□□ -1.08
SMC1A-204ENST00000463684 NKAPP1Q8N9T2 125 aa8.29□□□□□ -1.08
SMC1A-204ENST00000463684 CXCL5P42830 114 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 RPL23P62829 140 aaKnown RBP8.28□□□□□ -1.08
SMC1A-204ENST00000463684 ADIRFQ15847 76 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 TCTE3Q8IZS6 198 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 PRELID3AQ96N28 172 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 AMELXQ99217 191 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 CYSLTR1Q9Y271 337 aa8.28□□□□□ -1.08
SMC1A-204ENST00000463684 HERVK_113P63121 156 aa8.27□□□□□ -1.09
SMC1A-204ENST00000463684 SEC11AP67812 179 aa8.27□□□□□ -1.09
SMC1A-204ENST00000463684 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
SMC1A-204ENST00000463684 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
SMC1A-204ENST00000463684 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
SMC1A-204ENST00000463684 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-204ENST00000463684 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
SMC1A-204ENST00000463684 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
SMC1A-204ENST00000463684 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
SMC1A-204ENST00000463684 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
SMC1A-204ENST00000463684 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
SMC1A-204ENST00000463684 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
SMC1A-204ENST00000463684 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
SMC1A-204ENST00000463684 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
SMC1A-204ENST00000463684 NPSP0C0P6 89 aa8.25□□□□□ -1.09
SMC1A-204ENST00000463684 A0A1B0GXF2 115 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 PRSS47A8MTI9 375 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 PRLHP81277 87 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 MAP1LC3AQ9H492 121 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 NAT8Q9UHE5 227 aa8.24□□□□□ -1.09
SMC1A-204ENST00000463684 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
SMC1A-204ENST00000463684 RAB5BP61020 215 aa8.23□□□□□ -1.09
SMC1A-204ENST00000463684 PAPPA-AS1Q5QFB9 102 aa8.23□□□□□ -1.09
SMC1A-204ENST00000463684 C3orf22Q8N5N4 141 aa8.23□□□□□ -1.09
SMC1A-204ENST00000463684 IGIPA6NJ69 53 aa8.22□□□□□ -1.09
SMC1A-204ENST00000463684 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
SMC1A-204ENST00000463684 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
SMC1A-204ENST00000463684 LAMTOR2Q9Y2Q5 125 aa8.22□□□□□ -1.09
SMC1A-204ENST00000463684 Q8N8P6 123 aa8.21□□□□□ -1.1
SMC1A-204ENST00000463684 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
SMC1A-204ENST00000463684 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
SMC1A-204ENST00000463684 SCO1O75880 301 aa8.2□□□□□ -1.1
SMC1A-204ENST00000463684 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
SMC1A-204ENST00000463684 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
SMC1A-204ENST00000463684 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
SMC1A-204ENST00000463684 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
SMC1A-204ENST00000463684 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
SMC1A-204ENST00000463684 GNB1LQ9BYB4 327 aa8.19□□□□□ -1.1
SMC1A-204ENST00000463684 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
SMC1A-204ENST00000463684 K7EMI3 77 aa8.18□□□□□ -1.1
SMC1A-204ENST00000463684 G0S2P27469 103 aa8.18□□□□□ -1.1
SMC1A-204ENST00000463684 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
SMC1A-204ENST00000463684 TIMM17AQ99595 171 aa8.16□□□□□ -1.1
SMC1A-204ENST00000463684 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
SMC1A-204ENST00000463684 M0R378 163 aa8.15□□□□□ -1.1
SMC1A-204ENST00000463684 A0A1B0GVG6 124 aa8.14□□□□□ -1.11
SMC1A-204ENST00000463684 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
SMC1A-204ENST00000463684 C9JQL5 133 aa8.14□□□□□ -1.11
SMC1A-204ENST00000463684 ATP5LO75964 103 aa8.14□□□□□ -1.11
SMC1A-204ENST00000463684 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
SMC1A-204ENST00000463684 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
SMC1A-204ENST00000463684 VPREB1P12018 145 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 PFN2P35080 140 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 PEA15Q15121 130 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 Q8NBF4 154 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
SMC1A-204ENST00000463684 SPINK1P00995 79 aa8.12□□□□□ -1.11
SMC1A-204ENST00000463684 SPINK8P0C7L1 97 aa8.12□□□□□ -1.11
SMC1A-204ENST00000463684 ERASQ7Z444 233 aa8.12□□□□□ -1.11
SMC1A-204ENST00000463684 DAND5Q8N907 189 aa8.12□□□□□ -1.11
SMC1A-204ENST00000463684 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
SMC1A-204ENST00000463684 ZNF706Q9Y5V0 76 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-204ENST00000463684 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SMC1A-204ENST00000463684 SCGB3A1Q96QR1 104 aa8.11□□□□□ -1.11
SMC1A-204ENST00000463684 RAB14P61106 215 aa8.1□□□□□ -1.11
SMC1A-204ENST00000463684 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
SMC1A-204ENST00000463684 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
SMC1A-204ENST00000463684 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
SMC1A-204ENST00000463684 H3BRM9 83 aa8.08□□□□□ -1.12
SMC1A-204ENST00000463684 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
SMC1A-204ENST00000463684 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
SMC1A-204ENST00000463684 FAM19A2Q8N3H0 131 aa8.07□□□□□ -1.12
SMC1A-204ENST00000463684 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
SMC1A-204ENST00000463684 ADCYAP1P18509 176 aa8.06□□□□□ -1.12
SMC1A-204ENST00000463684 COX17Q14061 63 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms