RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BAALCQ8WXS3 180 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 CHCHD1Q96BP2 118 aaKnown RBP2.35□□□□□ -2.03
SCFD1-204ENST00000463622 KIR2DL4Q99706 377 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 HIST1H2BLQ99880 126 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 PMCHL2Q9BQD1 86 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 KLK12Q9UKR0 248 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 LRP2P98164 4655 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 IGKV3OR2-268A0A0C4DH90 116 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 TMEM262E9PQX1 116 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 SIVA1O15304 175 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 PPP1R17O96001 155 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 OXTP01178 125 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 DNAH10OSP0CZ25 163 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 COX6A2Q02221 97 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 MRPL52Q86TS9 123 aaKnown RBP2.34□□□□□ -2.03
SCFD1-204ENST00000463622 LINC00269Q8N2A0 174 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
SCFD1-204ENST00000463622 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 IGLV10-54A0A075B6I4 117 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 A0A087WTM6 91 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 H0Y8G0 127 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 C3orf79P0CE67 100 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 LINC01556Q5JQF7 62 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 UBE2WQ96B02 151 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 SCGB3A1Q96QR1 104 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 AMELXQ99217 191 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 Q9HAA7 133 aa2.34□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV13-1A0A0B4J241 112 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV8-6A0A0B4J262 113 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 A0A0J9YXV3 536 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 LINC00959A0A1B0GUT2 108 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 LOC105371267A0A1B0GV96 52 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 UBE2L6O14933 153 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
SCFD1-204ENST00000463622 UBE2D1P51668 147 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-204ENST00000463622 REG3AQ06141 175 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 MAJINQ3KP22 176 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 LINC00242Q5T6M2 205 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 ZNF664Q8N3J9 261 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 IFI27L1Q96BM0 104 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 TIMM17AQ99595 171 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 TIMM21Q9BVV7 248 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 PRR34Q9NV39 138 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 TP73-AS1Q9UF72 201 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
SCFD1-204ENST00000463622 C11orf86A6NJI1 115 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 IBA57-AS1B1ANH7 110 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 LECT2O14960 151 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 KRTDAPP60985 99 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
SCFD1-204ENST00000463622 AMMECR1LQ6DCA0 310 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 ERASQ7Z444 233 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 ATOH7Q8N100 152 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 Q8N377 158 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 OR5A1Q8NGJ0 315 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 OR10D4PQ8NGN7 298 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 TMEM141Q96I45 108 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 PACRGQ96M98 296 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-204ENST00000463622 CST9LQ9H4G1 147 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
SCFD1-204ENST00000463622 A0A087WX48 190 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 SYS1-DBNDD2H3BUS1 97 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 K7EMI3 77 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 CCL25O15444 150 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 S100A6P06703 90 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 XCL1P47992 114 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 HAMPP81172 84 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 TMEM97Q5BJF2 176 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 PYY3Q5JQD4 70 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 CHCHD10Q8WYQ3 142 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-204ENST00000463622 LINC00526Q96FQ7 95 aa2.32□□□□□ -2.04
SCFD1-204ENST00000463622 CSDC2Q9Y534 153 aaKnown RBP2.32□□□□□ -2.04
SCFD1-204ENST00000463622 DNAH8Q96JB1 4490 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 IGHV3-64A0A075B6Q5 118 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV8-3A0A0A6YYJ7 113 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-204ENST00000463622 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-204ENST00000463622 ZNF25P17030 456 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-204ENST00000463622 TSPEAR-AS2P59090 65 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 PMVKQ15126 192 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 Q6ZSA8 131 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 C5orf38Q86SI9 138 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 TTTY13Q9BZ97 58 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
SCFD1-204ENST00000463622 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 IGKV2D-26A0A0A0MRZ7 120 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 IGHV3OR16-9A0A0B4J2B5 98 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 ATP5LO75964 103 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms