RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 HIST1H2BLQ99880 126 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
NUP98-208ENST00000461047 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
NUP98-208ENST00000461047 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 C11orf86A6NJI1 115 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 LECT2O14960 151 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 C3orf79P0CE67 100 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 CXCL5P42830 114 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 COX6A2Q02221 97 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 Q8N814 137 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 C2orf48Q96LS8 159 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 CAMK2N2Q96S95 79 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 TENM2Q9NT68 2774 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 TOMM7Q9P0U1 55 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 CDKN2A-AS1Q9UH64 79 aa3.91□□□□□ -1.78
NUP98-208ENST00000461047 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 LRCOL1A6NCL2 159 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 LINC00587B1AMM8 73 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 NDUFA1O15239 70 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 SCGB1D1O95968 90 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 SYCNQ0VAF6 134 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 LINC01545Q5VT33 79 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 MAPKAPK5-AS1Q8N8E1 139 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 COX7B2Q8TF08 81 aa3.9□□□□□ -1.79
NUP98-208ENST00000461047 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.89□□□□□ -1.79
NUP98-208ENST00000461047 SPINK8P0C7L1 97 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
NUP98-208ENST00000461047 CNBPP62633 177 aaKnown RBP3.89□□□□□ -1.79
NUP98-208ENST00000461047 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 Q8IZM0 81 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 PLEKHB2Q96CS7 222 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
NUP98-208ENST00000461047 TRBV30A0A0K0K1B3 111 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
NUP98-208ENST00000461047 NMUP48645 174 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 HERV-K104P63124 156 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 C15orf56Q8N910 161 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 PMCHL2Q9BQD1 86 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 LINC00474Q9P2X8 69 aa3.88□□□□□ -1.79
NUP98-208ENST00000461047 IGLV5-39A0A0G2JS06 123 aa3.87□□□□□ -1.79
NUP98-208ENST00000461047 LOC107984640A0A0U1RRK4 108 aa3.87□□□□□ -1.79
NUP98-208ENST00000461047 MYMXA0A1B0GTQ4 84 aa3.87□□□□□ -1.79
NUP98-208ENST00000461047 LEPROTO15243 131 aa3.87□□□□□ -1.79
NUP98-208ENST00000461047 CIRBPQ14011 172 aaKnown RBP3.87□□□□□ -1.79
NUP98-208ENST00000461047 C9orf163Q8N9P6 203 aa3.87□□□□□ -1.79
NUP98-208ENST00000461047 C16orf90A8MZG2 172 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 E9PLD3 99 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 J3QQQ9 107 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 S100A12P80511 92 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 COX17Q14061 63 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 WFDC2Q14508 124 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 NDUFA12Q9UI09 145 aa3.86□□□□□ -1.79
NUP98-208ENST00000461047 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
NUP98-208ENST00000461047 MEIG1Q5JSS6 88 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 C2orf82Q6UX34 121 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 UNQ6190/PRO20217Q6UXQ8 127 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 Q6ZRU5 148 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 STPG4Q8N801 248 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
NUP98-208ENST00000461047 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 NDUFC2-KCTD14E9PQ53 114 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 LINC00158P58513 81 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
NUP98-208ENST00000461047 ATOH7Q8N100 152 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 VAMP8Q9BV40 100 aa3.84□□□□□ -1.79
NUP98-208ENST00000461047 ZNF815PA8K554 130 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 TLX1NBP0CAT3 122 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 PFN2P35080 140 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 GAGE2BQ13066 116 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 SCGB1D4Q6XE38 83 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 SDIM1Q6ZPB5 146 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 ZNF625Q96I27 306 aaPredicted RBP3.83□□□□□ -1.8
NUP98-208ENST00000461047 MIEN1Q9BRT3 115 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
NUP98-208ENST00000461047 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
NUP98-208ENST00000461047 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
NUP98-208ENST00000461047 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
NUP98-208ENST00000461047 IGKV2-24A0A0C4DH68 120 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 TIMM17BO60830 172 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 RPL24P83731 157 aaKnown RBP3.81□□□□□ -1.8
NUP98-208ENST00000461047 MAJINQ3KP22 176 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 SPATA45Q537H7 98 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 Q6ZVH6 145 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 ALMS1Q8TCU4 4167 aa3.81□□□□□ -1.8
NUP98-208ENST00000461047 CSMD3Q7Z407 3707 aa3.8□□□□□ -1.8
NUP98-208ENST00000461047 SMIM13P0DJ93 91 aa3.8□□□□□ -1.8
NUP98-208ENST00000461047 FUSP35637 526 aaKnown RBP eCLIP3.8□□□□□ -1.8
NUP98-208ENST00000461047 KRTAP10-1P60331 282 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms