RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
SCAMP4-206ENST00000460767 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
SCAMP4-206ENST00000460767 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
SCAMP4-206ENST00000460767 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
SCAMP4-206ENST00000460767 IGKV2-24A0A0C4DH68 120 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 NDUFA1O15239 70 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 TRGC2P03986 189 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 PMCHL1Q16048 86 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 Q8IZM0 81 aa8.5□□□□□ -1.05
SCAMP4-206ENST00000460767 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
SCAMP4-206ENST00000460767 MAJINQ3KP22 176 aa8.49□□□□□ -1.05
SCAMP4-206ENST00000460767 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
SCAMP4-206ENST00000460767 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
SCAMP4-206ENST00000460767 C2orf82Q6UX34 121 aa8.48□□□□□ -1.05
SCAMP4-206ENST00000460767 Q6ZRP5 223 aa8.48□□□□□ -1.05
SCAMP4-206ENST00000460767 STPG4Q8N801 248 aa8.48□□□□□ -1.05
SCAMP4-206ENST00000460767 IGLV5-39A0A0G2JS06 123 aa8.47□□□□□ -1.05
SCAMP4-206ENST00000460767 ATP5LO75964 103 aa8.47□□□□□ -1.05
SCAMP4-206ENST00000460767 GEMIN7Q9H840 131 aaKnown RBP8.47□□□□□ -1.05
SCAMP4-206ENST00000460767 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.06
SCAMP4-206ENST00000460767 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
SCAMP4-206ENST00000460767 C7orf33Q8WU49 177 aa8.46□□□□□ -1.06
SCAMP4-206ENST00000460767 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
SCAMP4-206ENST00000460767 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
SCAMP4-206ENST00000460767 TRAV12-1A0A0B4J245 112 aa8.44□□□□□ -1.06
SCAMP4-206ENST00000460767 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SCAMP4-206ENST00000460767 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
SCAMP4-206ENST00000460767 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
SCAMP4-206ENST00000460767 ODF1Q14990 250 aa8.44□□□□□ -1.06
SCAMP4-206ENST00000460767 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
SCAMP4-206ENST00000460767 NUPR1O60356 82 aa8.43□□□□□ -1.06
SCAMP4-206ENST00000460767 SCO1O75880 301 aa8.43□□□□□ -1.06
SCAMP4-206ENST00000460767 CXCL5P42830 114 aa8.43□□□□□ -1.06
SCAMP4-206ENST00000460767 C9orf116Q5BN46 136 aaPredicted RBP8.43□□□□□ -1.06
SCAMP4-206ENST00000460767 F8VRH5 84 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 SERF1AO75920 110 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 REG3GQ6UW15 175 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 PACRGQ96M98 296 aaPredicted RBP8.42□□□□□ -1.06
SCAMP4-206ENST00000460767 SPINK8P0C7L1 97 aa8.41□□□□□ -1.06
SCAMP4-206ENST00000460767 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
SCAMP4-206ENST00000460767 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
SCAMP4-206ENST00000460767 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
SCAMP4-206ENST00000460767 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
SCAMP4-206ENST00000460767 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
SCAMP4-206ENST00000460767 HSBP1O75506 76 aa8.4□□□□□ -1.06
SCAMP4-206ENST00000460767 PRSS2P07478 247 aa8.4□□□□□ -1.06
SCAMP4-206ENST00000460767 CKS1BP61024 79 aa8.4□□□□□ -1.06
SCAMP4-206ENST00000460767 H3BRM9 83 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
SCAMP4-206ENST00000460767 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
SCAMP4-206ENST00000460767 NDUFA6P56556 154 aa8.37□□□□□ -1.07
SCAMP4-206ENST00000460767 SRSF9Q13242 221 aaKnown RBP eCLIP8.37□□□□□ -1.07
SCAMP4-206ENST00000460767 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
SCAMP4-206ENST00000460767 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
SCAMP4-206ENST00000460767 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
SCAMP4-206ENST00000460767 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
SCAMP4-206ENST00000460767 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
SCAMP4-206ENST00000460767 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-206ENST00000460767 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
SCAMP4-206ENST00000460767 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
SCAMP4-206ENST00000460767 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
SCAMP4-206ENST00000460767 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
SCAMP4-206ENST00000460767 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
SCAMP4-206ENST00000460767 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
SCAMP4-206ENST00000460767 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
SCAMP4-206ENST00000460767 HSPB8Q9UJY1 196 aa8.32□□□□□ -1.08
SCAMP4-206ENST00000460767 LPAP08519 4548 aa8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 COX17Q14061 63 aa8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 TP73-AS1Q9UF72 201 aa8.31□□□□□ -1.08
SCAMP4-206ENST00000460767 M0QXV9 152 aa8.3□□□□□ -1.08
SCAMP4-206ENST00000460767 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
SCAMP4-206ENST00000460767 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
SCAMP4-206ENST00000460767 S100A1P23297 94 aa8.28□□□□□ -1.08
SCAMP4-206ENST00000460767 FABP4P15090 132 aa8.27□□□□□ -1.09
SCAMP4-206ENST00000460767 PLNP26678 52 aa8.27□□□□□ -1.09
SCAMP4-206ENST00000460767 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
SCAMP4-206ENST00000460767 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
SCAMP4-206ENST00000460767 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
SCAMP4-206ENST00000460767 Q8NDZ9 215 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms