RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
ABCA4-202ENST00000460514 LECT2O14960 151 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 SCGB1D1O95968 90 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 CXCL5P42830 114 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 SPAG11BQ08648 103 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 SFTA2Q6UW10 78 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 Q8N814 137 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 C15orf56Q8N910 161 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 NTN5Q8WTR8 489 aaPredicted RBP5□□□□□ -1.61
ABCA4-202ENST00000460514 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
ABCA4-202ENST00000460514 TMEM223A0PJW6 202 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 HSBP1L1C9JCN9 74 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 SPINK8P0C7L1 97 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 CKS1BP61024 79 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 HIGD2BQ4VC39 106 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 C6orf226Q5I0X4 101 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 Q8IZM0 81 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 PLEKHB2Q96CS7 222 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 PKIGQ9Y2B9 76 aa4.99□□□□□ -1.61
ABCA4-202ENST00000460514 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
ABCA4-202ENST00000460514 NDUFA1O15239 70 aa4.98□□□□□ -1.61
ABCA4-202ENST00000460514 PLA2G1BP04054 148 aaKnown RBP4.98□□□□□ -1.61
ABCA4-202ENST00000460514 CAMK2N2Q96S95 79 aa4.98□□□□□ -1.61
ABCA4-202ENST00000460514 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.97□□□□□ -1.61
ABCA4-202ENST00000460514 LEPROTO15243 131 aa4.97□□□□□ -1.61
ABCA4-202ENST00000460514 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
ABCA4-202ENST00000460514 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
ABCA4-202ENST00000460514 WFDC2Q14508 124 aa4.97□□□□□ -1.61
ABCA4-202ENST00000460514 JOSD1Q15040 202 aaPredicted RBP4.97□□□□□ -1.61
ABCA4-202ENST00000460514 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
ABCA4-202ENST00000460514 IGLV5-52A0A0A0MRZ9 124 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 E9PLD3 99 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 LGALS3P17931 250 aaKnown RBP4.96□□□□□ -1.62
ABCA4-202ENST00000460514 NMUP48645 174 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 ATOH7Q8N100 152 aa4.96□□□□□ -1.62
ABCA4-202ENST00000460514 MYMXA0A1B0GTQ4 84 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 LINC00587B1AMM8 73 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 J3QQQ9 107 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 HERV-K104P63124 156 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 RNF151Q2KHN1 245 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 STPG4Q8N801 248 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
ABCA4-202ENST00000460514 Q6ZRU5 148 aa4.94□□□□□ -1.62
ABCA4-202ENST00000460514 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
ABCA4-202ENST00000460514 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
ABCA4-202ENST00000460514 NDUFA12Q9UI09 145 aa4.94□□□□□ -1.62
ABCA4-202ENST00000460514 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
ABCA4-202ENST00000460514 S100A12P80511 92 aa4.93□□□□□ -1.62
ABCA4-202ENST00000460514 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
ABCA4-202ENST00000460514 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
ABCA4-202ENST00000460514 VAMP8Q9BV40 100 aa4.93□□□□□ -1.62
ABCA4-202ENST00000460514 LOC107984640A0A0U1RRK4 108 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 SLPIP03973 132 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 GCSHP23434 173 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 CIRBPQ14011 172 aaKnown RBP4.92□□□□□ -1.62
ABCA4-202ENST00000460514 COX17Q14061 63 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 PYY3Q5JQD4 70 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
ABCA4-202ENST00000460514 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
ABCA4-202ENST00000460514 RYR2Q92736 4967 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 TLX1NBP0CAT3 122 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 TSPEAR-AS2P59090 65 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 ERG28Q9UKR5 140 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
ABCA4-202ENST00000460514 IGKV2D-26A0A0A0MRZ7 120 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 LOC105371267A0A1B0GV96 52 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 NDUFC2-KCTD14E9PQ53 114 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 RPL18AQ02543 176 aaKnown RBP4.9□□□□□ -1.63
ABCA4-202ENST00000460514 MAJINQ3KP22 176 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 SPATA45Q537H7 98 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 SCGB1D4Q6XE38 83 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 PAM16Q9Y3D7 125 aa4.9□□□□□ -1.63
ABCA4-202ENST00000460514 FRAS1Q86XX4 4008 aa4.89□□□□□ -1.63
ABCA4-202ENST00000460514 PFN2P35080 140 aa4.89□□□□□ -1.63
ABCA4-202ENST00000460514 LINC00158P58513 81 aa4.89□□□□□ -1.63
ABCA4-202ENST00000460514 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
ABCA4-202ENST00000460514 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 TMEM238C9JI98 176 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 TIMM17BO60830 172 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 COX8AP10176 69 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
ABCA4-202ENST00000460514 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 GAGE2BQ13066 116 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
ABCA4-202ENST00000460514 COPS9Q8WXC6 57 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
ABCA4-202ENST00000460514 DNAH2Q9P225 4427 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms