RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
RFX3-210ENST00000457373 A0A096LNI7 61 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 NDUFA1O15239 70 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 HSBP1O75506 76 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 ATP5LO75964 103 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 KIAA0087Q14695 138 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
RFX3-210ENST00000457373 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
RFX3-210ENST00000457373 A0A087WYN8 130 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 F8WDY8 70 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 PRSS2P07478 247 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
RFX3-210ENST00000457373 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 PKIGQ9Y2B9 76 aa6.41□□□□□ -1.38
RFX3-210ENST00000457373 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
RFX3-210ENST00000457373 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
RFX3-210ENST00000457373 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
RFX3-210ENST00000457373 STPG4Q8N801 248 aa6.4□□□□□ -1.38
RFX3-210ENST00000457373 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
RFX3-210ENST00000457373 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
RFX3-210ENST00000457373 SERF1AO75920 110 aa6.39□□□□□ -1.39
RFX3-210ENST00000457373 SPINK8P0C7L1 97 aa6.39□□□□□ -1.39
RFX3-210ENST00000457373 INAFM2P0DMQ5 153 aa6.39□□□□□ -1.39
RFX3-210ENST00000457373 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 NUPR1O60356 82 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 CKS1BP61024 79 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 Q8IZM0 81 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
RFX3-210ENST00000457373 CHTOPQ9Y3Y2 248 aaKnown RBP6.38□□□□□ -1.39
RFX3-210ENST00000457373 H3BRM9 83 aa6.37□□□□□ -1.39
RFX3-210ENST00000457373 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
RFX3-210ENST00000457373 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 H0Y8G0 127 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 LEPROTL1O95214 131 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 FABP4P15090 132 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
RFX3-210ENST00000457373 RPL37AP61513 92 aaKnown RBP6.36□□□□□ -1.39
RFX3-210ENST00000457373 GAGE2EQ4V326 116 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 C9orf116Q5BN46 136 aaPredicted RBP6.36□□□□□ -1.39
RFX3-210ENST00000457373 GAGE2DQ9UEU5 116 aa6.36□□□□□ -1.39
RFX3-210ENST00000457373 TRAV12-1A0A0B4J245 112 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 C11orf86A6NJI1 115 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 S100A1P23297 94 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
RFX3-210ENST00000457373 TMEM170BQ5T4T1 132 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 Q6ZRP5 223 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
RFX3-210ENST00000457373 FAT1Q14517 4588 aa6.34□□□□□ -1.39
RFX3-210ENST00000457373 F8VRH5 84 aa6.34□□□□□ -1.39
RFX3-210ENST00000457373 ATP6V1G1O75348 118 aa6.34□□□□□ -1.39
RFX3-210ENST00000457373 CXCL5P42830 114 aa6.34□□□□□ -1.39
RFX3-210ENST00000457373 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
RFX3-210ENST00000457373 C7orf33Q8WU49 177 aa6.33□□□□□ -1.4
RFX3-210ENST00000457373 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
RFX3-210ENST00000457373 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
RFX3-210ENST00000457373 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
RFX3-210ENST00000457373 FAM168BA1KXE4 195 aa6.31□□□□□ -1.4
RFX3-210ENST00000457373 PHF5AQ7RTV0 110 aaKnown RBP6.31□□□□□ -1.4
RFX3-210ENST00000457373 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
RFX3-210ENST00000457373 C9orf129Q5T035 196 aaKnown RBP6.3□□□□□ -1.4
RFX3-210ENST00000457373 FAM19A5Q7Z5A7 132 aaPredicted RBP6.3□□□□□ -1.4
RFX3-210ENST00000457373 PMCHL2Q9BQD1 86 aa6.3□□□□□ -1.4
RFX3-210ENST00000457373 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
RFX3-210ENST00000457373 ZNF625Q96I27 306 aaPredicted RBP6.29□□□□□ -1.4
RFX3-210ENST00000457373 MAP1LC3CQ9BXW4 147 aa6.29□□□□□ -1.4
RFX3-210ENST00000457373 XAGE1AQ9HD64 81 aa6.29□□□□□ -1.4
RFX3-210ENST00000457373 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
RFX3-210ENST00000457373 PFN2P35080 140 aa6.28□□□□□ -1.4
RFX3-210ENST00000457373 HNRNPA3P51991 378 aaKnown RBP6.28□□□□□ -1.4
RFX3-210ENST00000457373 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
RFX3-210ENST00000457373 M0QXV9 152 aa6.26□□□□□ -1.41
RFX3-210ENST00000457373 DPM2O94777 84 aa6.26□□□□□ -1.41
RFX3-210ENST00000457373 IGKCP01834 107 aa6.26□□□□□ -1.41
RFX3-210ENST00000457373 PRR3P79522 188 aaKnown RBP6.26□□□□□ -1.41
RFX3-210ENST00000457373 PET117Q6UWS5 81 aa6.26□□□□□ -1.41
RFX3-210ENST00000457373 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
RFX3-210ENST00000457373 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
RFX3-210ENST00000457373 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms