RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 LINC00167Q96N53 147 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 NDUFC2O95298 119 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 XCL1P47992 114 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
CLIP4-208ENST00000456385 PLAC8L1A1L4L8 177 aa7.15□□□□□ -1.26
CLIP4-208ENST00000456385 TMEM256-PLSCR3K7ERE1 68 aa7.15□□□□□ -1.26
CLIP4-208ENST00000456385 SETD2Q9BYW2 2564 aaPredicted RBP7.15□□□□□ -1.26
CLIP4-208ENST00000456385 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.27
CLIP4-208ENST00000456385 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.27
CLIP4-208ENST00000456385 Q6YL49 198 aa7.15□□□□□ -1.27
CLIP4-208ENST00000456385 LINC01356Q8N9X3 169 aa7.15□□□□□ -1.27
CLIP4-208ENST00000456385 UBL5Q9BZL1 73 aa7.15□□□□□ -1.27
CLIP4-208ENST00000456385 TRGV4A0A0C4DH28 118 aa7.14□□□□□ -1.27
CLIP4-208ENST00000456385 M0R2N4 97 aa7.14□□□□□ -1.27
CLIP4-208ENST00000456385 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
CLIP4-208ENST00000456385 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
CLIP4-208ENST00000456385 C4orf3Q8WVX3 66 aa7.14□□□□□ -1.27
CLIP4-208ENST00000456385 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
CLIP4-208ENST00000456385 FAM236DA0A1B0GTK5 79 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 GIG44P09565 113 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-208ENST00000456385 FAM236CP0DP71 79 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 TMEM86BQ8N661 226 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 WFDC10AQ9H1F0 79 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 ANKRD17O75179 2603 aaKnown RBP7.13□□□□□ -1.27
CLIP4-208ENST00000456385 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 H7BZZ5 65 aa7.13□□□□□ -1.27
CLIP4-208ENST00000456385 NBEAL2Q6ZNJ1 2754 aa7.12□□□□□ -1.27
CLIP4-208ENST00000456385 Q8NDZ9 215 aa7.12□□□□□ -1.27
CLIP4-208ENST00000456385 SNURFQ9Y675 71 aa7.12□□□□□ -1.27
CLIP4-208ENST00000456385 TRAV10A0A0B4J240 114 aa7.11□□□□□ -1.27
CLIP4-208ENST00000456385 A0A1W2PRX2 142 aa7.11□□□□□ -1.27
CLIP4-208ENST00000456385 C6orf99Q4VX62 202 aa7.11□□□□□ -1.27
CLIP4-208ENST00000456385 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-208ENST00000456385 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
CLIP4-208ENST00000456385 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
CLIP4-208ENST00000456385 Q6ZQT0 140 aa7.1□□□□□ -1.27
CLIP4-208ENST00000456385 SPATA3Q8NHX4 192 aa7.1□□□□□ -1.27
CLIP4-208ENST00000456385 DOPEY1Q5JWR5 2465 aa7.1□□□□□ -1.27
CLIP4-208ENST00000456385 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
CLIP4-208ENST00000456385 HAMPP81172 84 aa7.1□□□□□ -1.27
CLIP4-208ENST00000456385 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
CLIP4-208ENST00000456385 LINC00336Q6ZUF6 198 aa7.09□□□□□ -1.27
CLIP4-208ENST00000456385 Q8IZM0 81 aa7.09□□□□□ -1.27
CLIP4-208ENST00000456385 RMI2Q96E14 147 aa7.09□□□□□ -1.27
CLIP4-208ENST00000456385 C16orf74Q96GX8 76 aa7.09□□□□□ -1.27
CLIP4-208ENST00000456385 LRRK2Q5S007 2527 aa7.09□□□□□ -1.27
CLIP4-208ENST00000456385 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.28
CLIP4-208ENST00000456385 APCP25054 2843 aa7.09□□□□□ -1.28
CLIP4-208ENST00000456385 MYO18BQ8IUG5 2567 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 A0A096LPF7 62 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 PTPN13Q12923 2485 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 NAV2Q8IVL1 2488 aa7.08□□□□□ -1.28
CLIP4-208ENST00000456385 J3QLI3 93 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 SONP18583 2426 aaKnown RBP7.07□□□□□ -1.28
CLIP4-208ENST00000456385 FSHBP01225 129 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 Q6ZVQ6 151 aa7.07□□□□□ -1.28
CLIP4-208ENST00000456385 CR1P17927 2039 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 IGLV10-54A0A075B6I4 117 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 LINC00269Q8N2A0 174 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 ZFYVE26Q68DK2 2539 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 GCN1Q92616 2671 aaKnown RBP7.06□□□□□ -1.28
CLIP4-208ENST00000456385 F8WEM9 126 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 ZNF843Q8N446 348 aa7.06□□□□□ -1.28
CLIP4-208ENST00000456385 Q8N3U1 123 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 CSNK1G2-AS1Q8NCQ2 148 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 ABCA12Q86UK0 2595 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 GYPEP15421 78 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 DSCR9P59020 149 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
CLIP4-208ENST00000456385 SCXQ7RTU7 201 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 MRAPQ8TCY5 172 aa7.05□□□□□ -1.28
CLIP4-208ENST00000456385 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 CCL24O00175 119 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 PKD1L2Q7Z442 2459 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 IGHV4-31P0DP07 118 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 C16orf95Q9H693 158 aa7.04□□□□□ -1.28
CLIP4-208ENST00000456385 ACACBO00763 2458 aa7.03□□□□□ -1.28
CLIP4-208ENST00000456385 Q6ZQY7 126 aa7.03□□□□□ -1.28
CLIP4-208ENST00000456385 C6orf223Q8N319 242 aa7.03□□□□□ -1.28
CLIP4-208ENST00000456385 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
CLIP4-208ENST00000456385 COX17Q14061 63 aa7.02□□□□□ -1.28
CLIP4-208ENST00000456385 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.29
CLIP4-208ENST00000456385 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
CLIP4-208ENST00000456385 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
CLIP4-208ENST00000456385 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
CLIP4-208ENST00000456385 WFDC11Q8NEX6 87 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms