RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 LINC00612Q8N6U2 182 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 TENM2Q9NT68 2774 aa10.52□□□□□ -0.73
GTF2IRD1-203ENST00000455841 CRPP02741 224 aa10.51□□□□□ -0.73
GTF2IRD1-203ENST00000455841 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 DEFB131BA0A096LNP1 70 aa10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
GTF2IRD1-203ENST00000455841 COX7A2LO14548 114 aa10.49□□□□□ -0.73
GTF2IRD1-203ENST00000455841 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
GTF2IRD1-203ENST00000455841 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 COX6CP09669 75 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 ANK2Q01484 3957 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 H7C423 109 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 SPANXCQ9NY87 97 aa10.48□□□□□ -0.73
GTF2IRD1-203ENST00000455841 A0A087WZ39 114 aa10.47□□□□□ -0.73
GTF2IRD1-203ENST00000455841 A0A0B4J2C4 111 aa10.46□□□□□ -0.73
GTF2IRD1-203ENST00000455841 F8W1H4 67 aa10.46□□□□□ -0.73
GTF2IRD1-203ENST00000455841 SLC25A20O43772 301 aa10.45□□□□□ -0.74
GTF2IRD1-203ENST00000455841 LYPD5Q6UWN5 251 aa10.45□□□□□ -0.74
GTF2IRD1-203ENST00000455841 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
GTF2IRD1-203ENST00000455841 LELP1Q5T871 98 aa10.44□□□□□ -0.74
GTF2IRD1-203ENST00000455841 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 HERV-K104P63124 156 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 CCL18P55774 89 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 IFITM1P13164 125 aa10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 NTN5Q8WTR8 489 aaPredicted RBP10.43□□□□□ -0.74
GTF2IRD1-203ENST00000455841 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
GTF2IRD1-203ENST00000455841 MDFIQ99750 246 aa10.42□□□□□ -0.74
GTF2IRD1-203ENST00000455841 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
GTF2IRD1-203ENST00000455841 ATXN8Q156A1 80 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 ESRGQ1W209 222 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 C10orf25Q5T742 122 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 LINC01620Q4KN68 170 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
GTF2IRD1-203ENST00000455841 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
GTF2IRD1-203ENST00000455841 J3QR89 54 aa10.4□□□□□ -0.74
GTF2IRD1-203ENST00000455841 NCR3O14931 201 aa10.4□□□□□ -0.74
GTF2IRD1-203ENST00000455841 LECT2O14960 151 aa10.4□□□□□ -0.75
GTF2IRD1-203ENST00000455841 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.75
GTF2IRD1-203ENST00000455841 K7EIL1 84 aa10.38□□□□□ -0.75
GTF2IRD1-203ENST00000455841 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
GTF2IRD1-203ENST00000455841 TIMM17BO60830 172 aa10.38□□□□□ -0.75
GTF2IRD1-203ENST00000455841 TEX49A0A1B0GTD5 131 aa10.38□□□□□ -0.75
GTF2IRD1-203ENST00000455841 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
GTF2IRD1-203ENST00000455841 WIPF1O43516 503 aa10.37□□□□□ -0.75
GTF2IRD1-203ENST00000455841 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
GTF2IRD1-203ENST00000455841 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
GTF2IRD1-203ENST00000455841 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
GTF2IRD1-203ENST00000455841 GAGE2EQ4V326 116 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 GAGE2DQ9UEU5 116 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 FOXI1Q12951 378 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 TRBV30A0A0K0K1B3 111 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 IBA57-AS1B1ANH7 110 aa10.35□□□□□ -0.75
GTF2IRD1-203ENST00000455841 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
GTF2IRD1-203ENST00000455841 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
GTF2IRD1-203ENST00000455841 SLPIP03973 132 aa10.34□□□□□ -0.75
GTF2IRD1-203ENST00000455841 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
GTF2IRD1-203ENST00000455841 TEN1Q86WV5 123 aa10.33□□□□□ -0.76
GTF2IRD1-203ENST00000455841 Q8IZM0 81 aa10.33□□□□□ -0.76
GTF2IRD1-203ENST00000455841 SMIM11BQ8TCY0 68 aa10.33□□□□□ -0.76
GTF2IRD1-203ENST00000455841 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
GTF2IRD1-203ENST00000455841 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
GTF2IRD1-203ENST00000455841 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
GTF2IRD1-203ENST00000455841 FAM218AQ96MZ4 157 aa10.32□□□□□ -0.76
GTF2IRD1-203ENST00000455841 DNAL4O96015 105 aa10.32□□□□□ -0.76
GTF2IRD1-203ENST00000455841 RPL18AQ02543 176 aaKnown RBP10.31□□□□□ -0.76
GTF2IRD1-203ENST00000455841 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
GTF2IRD1-203ENST00000455841 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
GTF2IRD1-203ENST00000455841 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
GTF2IRD1-203ENST00000455841 COL7A1Q02388 2944 aa10.29□□□□□ -0.76
GTF2IRD1-203ENST00000455841 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
GTF2IRD1-203ENST00000455841 LST1O00453 97 aa10.28□□□□□ -0.76
GTF2IRD1-203ENST00000455841 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
GTF2IRD1-203ENST00000455841 A0A087WYN8 130 aa10.27□□□□□ -0.76
GTF2IRD1-203ENST00000455841 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
GTF2IRD1-203ENST00000455841 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
GTF2IRD1-203ENST00000455841 Q8NDZ9 215 aa10.25□□□□□ -0.77
GTF2IRD1-203ENST00000455841 UBE2DNLQ8IWF7 75 aa10.25□□□□□ -0.77
GTF2IRD1-203ENST00000455841 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
GTF2IRD1-203ENST00000455841 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 LINC00588Q9Y4M8 146 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 TGP01266 2768 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 Q6ZRU5 148 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 C6orf48Q9UBA6 75 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 PRR34Q9NV39 138 aa10.23□□□□□ -0.77
GTF2IRD1-203ENST00000455841 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
GTF2IRD1-203ENST00000455841 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms