RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TIMM21Q9BVV7 248 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 NAT8Q9UHE5 227 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 PKIGQ9Y2B9 76 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 LRP2P98164 4655 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 LOC389332A0A1B0GUA5 103 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 PPP1R2P9O14990 202 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 SMAGPQ0VAQ4 97 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 PEA15Q15121 130 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 KIAA1644Q3SXP7 199 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 C2orf82Q6UX34 121 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM19A5Q7Z5A7 132 aaPredicted RBP2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 SMIM2Q9BVW6 85 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 C6orf48Q9UBA6 75 aa2.84□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A1B0GXF2 115 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 NDUFA1O15239 70 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 RAB5AP20339 215 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 HBBP68871 147 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 MRPS36P82909 103 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 LINC00242Q5T6M2 205 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 PRELID3AQ96N28 172 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 IMMP2LQ96T52 175 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 SPANXA1Q9NS26 97 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 MRPL35Q9NZE8 188 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 LPAP08519 4548 aa2.83□□□□□ -1.96
GTF3C3-208ENST00000455546 IGLV4-3A0A075B6K6 122 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 A0A1B0GW15 77 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 F8W036 122 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 C9orf129Q5T035 196 aaKnown RBP2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 LINC00469Q8N7U9 141 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 SMDT1Q9H4I9 107 aa2.82□□□□□ -1.96
GTF3C3-208ENST00000455546 TGIF2-C20orf24A0A0A6YYL0 155 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 H0Y9J4 135 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 M0QXV9 152 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 PPBPP02775 128 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 S100A8P05109 93 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 UBE2D1P51668 147 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 UBE2BP63146 152 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 LINC00173Q6ZV60 143 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 ORMDL3Q8N138 153 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 TMEM141Q96I45 108 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 TOMM7Q9P0U1 55 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 PYGO1Q9Y3Y4 419 aa2.81□□□□□ -1.96
GTF3C3-208ENST00000455546 TRBV30A0A0K0K1B3 111 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 NDUFC2-KCTD14E9PQ53 114 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 F8WDY8 70 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 TSPAN13O95857 204 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 C6orf226Q5I0X4 101 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 C2orf66Q6UXQ4 117 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 TEX43Q6ZNM6 134 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 Q8N8P6 123 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 PACRGQ96M98 296 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 ALKBH7Q9BT30 221 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 VCX2Q9H322 139 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 XAGE1AQ9HD64 81 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
GTF3C3-208ENST00000455546 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 CFC1BP0CG36 223 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 CFC1P0CG37 223 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 CKS1BP61024 79 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 PRR4Q16378 134 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 Q6ZN92 141 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 ATP5L2Q7Z4Y8 100 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 AMELXQ99217 191 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 C2orf88Q9BSF0 95 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 MAP1LC3AQ9H492 121 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 CDKN2A-AS1Q9UH64 79 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
GTF3C3-208ENST00000455546 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 RPL37AP8A6NKH3 93 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 ZNF861PO60384 105 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 MT-ND4LP03901 98 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 RAB5BP61020 215 aa2.78□□□□□ -1.96
GTF3C3-208ENST00000455546 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 ORMDL2Q53FV1 153 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 FAM19A3Q7Z5A8 133 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 Q8IZM0 81 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 LINC01561Q8N1V8 128 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 TOMM6Q96B49 74 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 LINC00167Q96N53 147 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 LITAFQ99732 161 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 GEMIN7Q9H840 131 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 LAMTOR2Q9Y2Q5 125 aa2.77□□□□□ -1.97
GTF3C3-208ENST00000455546 A0A087X002 238 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 SCO1O75880 301 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 SPINK8P0C7L1 97 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 HERVK_113P63121 156 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 ADAMTSL4-AS1Q5T5F5 129 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 MRPL55Q7Z7F7 128 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms