RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 SDIM1Q6ZPB5 146 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
HMGXB4-204ENST00000455359 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
HMGXB4-204ENST00000455359 KRTDAPP60985 99 aa9.23□□□□□ -0.93
HMGXB4-204ENST00000455359 Q6ZRU5 148 aa9.23□□□□□ -0.93
HMGXB4-204ENST00000455359 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
HMGXB4-204ENST00000455359 HERVK_113P61574 105 aa9.21□□□□□ -0.94
HMGXB4-204ENST00000455359 UNQ6190/PRO20217Q6UXQ8 127 aa9.21□□□□□ -0.94
HMGXB4-204ENST00000455359 Q6ZSA8 131 aa9.21□□□□□ -0.94
HMGXB4-204ENST00000455359 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
HMGXB4-204ENST00000455359 PMCHL2Q9BQD1 86 aa9.2□□□□□ -0.94
HMGXB4-204ENST00000455359 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
HMGXB4-204ENST00000455359 LOC107984640A0A0U1RRK4 108 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 LINC01620Q4KN68 170 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
HMGXB4-204ENST00000455359 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-204ENST00000455359 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
HMGXB4-204ENST00000455359 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
HMGXB4-204ENST00000455359 LEPROTO15243 131 aa9.16□□□□□ -0.94
HMGXB4-204ENST00000455359 E9PLD3 99 aa9.15□□□□□ -0.94
HMGXB4-204ENST00000455359 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
HMGXB4-204ENST00000455359 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
HMGXB4-204ENST00000455359 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
HMGXB4-204ENST00000455359 FAM30AQ9NZY2 134 aa9.14□□□□□ -0.95
HMGXB4-204ENST00000455359 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 NMUP48645 174 aa9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 HERV-K104P63124 156 aa9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 COX17Q14061 63 aa9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
HMGXB4-204ENST00000455359 A0A096LNI7 61 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 J3QQQ9 107 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 XGP55808 180 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 KIAA1109Q2LD37 5005 aa9.12□□□□□ -0.95
HMGXB4-204ENST00000455359 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-204ENST00000455359 RPL18AQ02543 176 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-204ENST00000455359 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
HMGXB4-204ENST00000455359 Q6ZRP5 223 aa9.11□□□□□ -0.95
HMGXB4-204ENST00000455359 TMA7Q9Y2S6 64 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-204ENST00000455359 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 MAJINQ3KP22 176 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 C9orf116Q5BN46 136 aaPredicted RBP9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 STPG4Q8N801 248 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 RYR1P21817 5038 aa9.1□□□□□ -0.95
HMGXB4-204ENST00000455359 PANO1I0J062 215 aa9.09□□□□□ -0.95
HMGXB4-204ENST00000455359 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
HMGXB4-204ENST00000455359 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
HMGXB4-204ENST00000455359 CIRBP-AS1Q8TBR5 109 aa9.09□□□□□ -0.95
HMGXB4-204ENST00000455359 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
HMGXB4-204ENST00000455359 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
HMGXB4-204ENST00000455359 A0A087WYN8 130 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 HSBP1L1C9JCN9 74 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 SCGB1D1O95968 90 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
HMGXB4-204ENST00000455359 PFN2P35080 140 aa9.05□□□□□ -0.96
HMGXB4-204ENST00000455359 ATOH7Q8N100 152 aa9.05□□□□□ -0.96
HMGXB4-204ENST00000455359 LINC00158P58513 81 aa9.05□□□□□ -0.96
HMGXB4-204ENST00000455359 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
HMGXB4-204ENST00000455359 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
HMGXB4-204ENST00000455359 IGKV2D-26A0A0A0MRZ7 120 aa9.04□□□□□ -0.96
HMGXB4-204ENST00000455359 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
HMGXB4-204ENST00000455359 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
HMGXB4-204ENST00000455359 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
HMGXB4-204ENST00000455359 HSPG2P98160 4391 aa9.03□□□□□ -0.96
HMGXB4-204ENST00000455359 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
HMGXB4-204ENST00000455359 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
HMGXB4-204ENST00000455359 ZNF815PA8K554 130 aa9.02□□□□□ -0.97
HMGXB4-204ENST00000455359 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
HMGXB4-204ENST00000455359 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
HMGXB4-204ENST00000455359 HERC2O95714 4834 aa9.01□□□□□ -0.97
HMGXB4-204ENST00000455359 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
HMGXB4-204ENST00000455359 TIMM17BO60830 172 aa9.01□□□□□ -0.97
HMGXB4-204ENST00000455359 HAMPP81172 84 aa9.01□□□□□ -0.97
HMGXB4-204ENST00000455359 Q8N1X5 172 aa9.01□□□□□ -0.97
HMGXB4-204ENST00000455359 C7orf33Q8WU49 177 aa9□□□□□ -0.97
HMGXB4-204ENST00000455359 TP73-AS1Q9UF72 201 aa9□□□□□ -0.97
HMGXB4-204ENST00000455359 FAM229AH3BQW9 127 aa8.99□□□□□ -0.97
HMGXB4-204ENST00000455359 RPL24P83731 157 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-204ENST00000455359 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
HMGXB4-204ENST00000455359 FAT1Q14517 4588 aa8.99□□□□□ -0.97
HMGXB4-204ENST00000455359 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
HMGXB4-204ENST00000455359 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
HMGXB4-204ENST00000455359 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
HMGXB4-204ENST00000455359 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-204ENST00000455359 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-204ENST00000455359 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms