RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PEA15Q15121 130 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 C2orf82Q6UX34 121 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 PRSS47A8MTI9 375 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 NUPR1O60356 82 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 NPSP0C0P6 89 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 Q6ZN92 141 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 CYSLTR1Q9Y271 337 aa6.51□□□□□ -1.37
USP1-204ENST00000452143 ZNF861PO60384 105 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 PRSS2P07478 247 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 CKS1BP61024 79 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 SRSF3P84103 164 aaKnown RBP6.5□□□□□ -1.37
USP1-204ENST00000452143 PRR4Q16378 134 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 Q8IZM0 81 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 MAP1LC3AQ9H492 121 aa6.5□□□□□ -1.37
USP1-204ENST00000452143 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
USP1-204ENST00000452143 K7EMI3 77 aa6.49□□□□□ -1.37
USP1-204ENST00000452143 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
USP1-204ENST00000452143 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
USP1-204ENST00000452143 AMELXQ99217 191 aa6.49□□□□□ -1.37
USP1-204ENST00000452143 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
USP1-204ENST00000452143 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
USP1-204ENST00000452143 C2orf66Q6UXQ4 117 aa6.48□□□□□ -1.37
USP1-204ENST00000452143 VCX2Q9H322 139 aa6.48□□□□□ -1.37
USP1-204ENST00000452143 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
USP1-204ENST00000452143 HERVK_113P63121 156 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 SEC11AP67812 179 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 C6orf226Q5I0X4 101 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 Q8N8P6 123 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
USP1-204ENST00000452143 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
USP1-204ENST00000452143 F8VRH5 84 aa6.46□□□□□ -1.38
USP1-204ENST00000452143 CXCL5P42830 114 aa6.46□□□□□ -1.38
USP1-204ENST00000452143 RPL28P46779 137 aaKnown RBP6.46□□□□□ -1.38
USP1-204ENST00000452143 PAPPA-AS1Q5QFB9 102 aa6.46□□□□□ -1.38
USP1-204ENST00000452143 ALKBH7Q9BT30 221 aaPredicted RBP6.46□□□□□ -1.38
USP1-204ENST00000452143 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
USP1-204ENST00000452143 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
USP1-204ENST00000452143 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
USP1-204ENST00000452143 CTDSP1Q9GZU7 261 aa6.45□□□□□ -1.38
USP1-204ENST00000452143 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
USP1-204ENST00000452143 BCE1O60756 84 aa6.44□□□□□ -1.38
USP1-204ENST00000452143 G0S2P27469 103 aa6.44□□□□□ -1.38
USP1-204ENST00000452143 PNRC1Q12796 327 aaPredicted RBP6.44□□□□□ -1.38
USP1-204ENST00000452143 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
USP1-204ENST00000452143 TIMM17AQ99595 171 aa6.44□□□□□ -1.38
USP1-204ENST00000452143 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
USP1-204ENST00000452143 CDKN2A-AS1Q9UH64 79 aa6.44□□□□□ -1.38
USP1-204ENST00000452143 A0A087X002 238 aa6.43□□□□□ -1.38
USP1-204ENST00000452143 CRYGAP11844 174 aa6.43□□□□□ -1.38
USP1-204ENST00000452143 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
USP1-204ENST00000452143 GEMIN7Q9H840 131 aaKnown RBP6.43□□□□□ -1.38
USP1-204ENST00000452143 TSPAN13O95857 204 aa6.41□□□□□ -1.38
USP1-204ENST00000452143 MT-ND4LP03901 98 aa6.41□□□□□ -1.38
USP1-204ENST00000452143 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
USP1-204ENST00000452143 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
USP1-204ENST00000452143 SMIM1B2RUZ4 78 aa6.4□□□□□ -1.38
USP1-204ENST00000452143 TOMM6Q96B49 74 aa6.4□□□□□ -1.38
USP1-204ENST00000452143 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 PDZD11Q5EBL8 140 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 ERASQ7Z444 233 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 LINC00167Q96N53 147 aa6.39□□□□□ -1.39
USP1-204ENST00000452143 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
USP1-204ENST00000452143 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
USP1-204ENST00000452143 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
USP1-204ENST00000452143 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
USP1-204ENST00000452143 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
USP1-204ENST00000452143 RPL37AP8A6NKH3 93 aa6.37□□□□□ -1.39
USP1-204ENST00000452143 NKAPP1Q8N9T2 125 aa6.37□□□□□ -1.39
USP1-204ENST00000452143 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
USP1-204ENST00000452143 A0A1B0GVG6 124 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 UBE2AP49459 152 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 CTAG1AP78358 180 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 KRTAP13-2Q52LG2 175 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
USP1-204ENST00000452143 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
USP1-204ENST00000452143 LINC01546A6NGU7 62 aa6.34□□□□□ -1.39
USP1-204ENST00000452143 ATP5LO75964 103 aa6.34□□□□□ -1.39
USP1-204ENST00000452143 TPRXLQ17RH7 258 aa6.34□□□□□ -1.39
USP1-204ENST00000452143 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
USP1-204ENST00000452143 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 H3BRM9 83 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 RAB5BP61020 215 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 ANAPC11Q9NYG5 84 aa6.33□□□□□ -1.4
USP1-204ENST00000452143 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
USP1-204ENST00000452143 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
USP1-204ENST00000452143 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
USP1-204ENST00000452143 PMVKQ15126 192 aa6.32□□□□□ -1.4
USP1-204ENST00000452143 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
USP1-204ENST00000452143 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms