RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
COL27A1-202ENST00000451716 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
COL27A1-202ENST00000451716 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
COL27A1-202ENST00000451716 ATOX1O00244 68 aa8.54□□□□□ -1.04
COL27A1-202ENST00000451716 LITAFQ99732 161 aa8.54□□□□□ -1.04
COL27A1-202ENST00000451716 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
COL27A1-202ENST00000451716 C2orf82Q6UX34 121 aa8.53□□□□□ -1.04
COL27A1-202ENST00000451716 DAND5Q8N907 189 aa8.53□□□□□ -1.04
COL27A1-202ENST00000451716 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
COL27A1-202ENST00000451716 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.04
COL27A1-202ENST00000451716 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.04
COL27A1-202ENST00000451716 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
COL27A1-202ENST00000451716 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 UBE2L6O14933 153 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 FHL2Q14192 279 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
COL27A1-202ENST00000451716 F8P00451 2351 aa8.5□□□□□ -1.05
COL27A1-202ENST00000451716 TMEM243Q9BU79 118 aa8.5□□□□□ -1.05
COL27A1-202ENST00000451716 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
COL27A1-202ENST00000451716 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
COL27A1-202ENST00000451716 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
COL27A1-202ENST00000451716 DEFB4AO15263 64 aa8.49□□□□□ -1.05
COL27A1-202ENST00000451716 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
COL27A1-202ENST00000451716 PMAIP1Q13794 54 aa8.48□□□□□ -1.05
COL27A1-202ENST00000451716 Q1RN00 199 aa8.48□□□□□ -1.05
COL27A1-202ENST00000451716 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
COL27A1-202ENST00000451716 Q9H8V8 135 aa8.48□□□□□ -1.05
COL27A1-202ENST00000451716 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
COL27A1-202ENST00000451716 SMIM1B2RUZ4 78 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 SERP2Q8N6R1 65 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 NDUFC2O95298 119 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
COL27A1-202ENST00000451716 A0A096LPF7 62 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 CXCL5P42830 114 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 HIST1H4AP62805 103 aaKnown RBP8.47□□□□□ -1.05
COL27A1-202ENST00000451716 MIAQ16674 131 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 X6R8D5 127 aa8.47□□□□□ -1.05
COL27A1-202ENST00000451716 PKD1L1Q8TDX9 2849 aa8.46□□□□□ -1.06
COL27A1-202ENST00000451716 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
COL27A1-202ENST00000451716 H3BT86 120 aa8.46□□□□□ -1.06
COL27A1-202ENST00000451716 H7C423 109 aa8.46□□□□□ -1.06
COL27A1-202ENST00000451716 DEFB135Q30KP9 77 aa8.46□□□□□ -1.06
COL27A1-202ENST00000451716 BAHCC1Q9P281 2608 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
COL27A1-202ENST00000451716 NDUFA1O15239 70 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 ACYP1P07311 99 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 FBN1P35555 2871 aaKnown RBP8.45□□□□□ -1.06
COL27A1-202ENST00000451716 RPL18AQ02543 176 aaKnown RBP8.45□□□□□ -1.06
COL27A1-202ENST00000451716 DEFB121Q5J5C9 76 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
COL27A1-202ENST00000451716 GYPEP15421 78 aa8.44□□□□□ -1.06
COL27A1-202ENST00000451716 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
COL27A1-202ENST00000451716 FP248Q71RG6 208 aaPredicted RBP8.44□□□□□ -1.06
COL27A1-202ENST00000451716 FAM222AQ5U5X8 452 aa8.43□□□□□ -1.06
COL27A1-202ENST00000451716 SERP1Q9Y6X1 66 aa8.43□□□□□ -1.06
COL27A1-202ENST00000451716 TRIAP1O43715 76 aa8.43□□□□□ -1.06
COL27A1-202ENST00000451716 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
COL27A1-202ENST00000451716 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
COL27A1-202ENST00000451716 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
COL27A1-202ENST00000451716 CD164Q04900 197 aa8.42□□□□□ -1.06
COL27A1-202ENST00000451716 SS18Q15532 418 aa8.42□□□□□ -1.06
COL27A1-202ENST00000451716 MAST4O15021 2626 aa8.41□□□□□ -1.06
COL27A1-202ENST00000451716 LINC00308Q8TCZ7 52 aa8.41□□□□□ -1.06
COL27A1-202ENST00000451716 SMIM26A0A096LP01 95 aa8.4□□□□□ -1.06
COL27A1-202ENST00000451716 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.06
COL27A1-202ENST00000451716 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
COL27A1-202ENST00000451716 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.06
COL27A1-202ENST00000451716 TIMM17BO60830 172 aa8.4□□□□□ -1.06
COL27A1-202ENST00000451716 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.07
COL27A1-202ENST00000451716 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
COL27A1-202ENST00000451716 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 CLEC2BQ92478 149 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 PAX4O43316 350 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
COL27A1-202ENST00000451716 Q8N3U1 123 aa8.37□□□□□ -1.07
COL27A1-202ENST00000451716 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
COL27A1-202ENST00000451716 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
COL27A1-202ENST00000451716 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
COL27A1-202ENST00000451716 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
COL27A1-202ENST00000451716 COL6A5A8TX70 2615 aa8.37□□□□□ -1.07
COL27A1-202ENST00000451716 XCL1P47992 114 aa8.36□□□□□ -1.07
COL27A1-202ENST00000451716 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
COL27A1-202ENST00000451716 HTN3P15516 51 aa8.36□□□□□ -1.07
COL27A1-202ENST00000451716 APOC4P55056 127 aa8.35□□□□□ -1.07
COL27A1-202ENST00000451716 A0A087WVE0 104 aa8.35□□□□□ -1.07
COL27A1-202ENST00000451716 DAD1P61803 113 aa8.35□□□□□ -1.07
COL27A1-202ENST00000451716 ANK2Q01484 3957 aa8.34□□□□□ -1.07
COL27A1-202ENST00000451716 LYRM9A8MSI8 78 aa8.34□□□□□ -1.07
COL27A1-202ENST00000451716 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
COL27A1-202ENST00000451716 USP17L23D6RBM5 183 aa8.34□□□□□ -1.07
COL27A1-202ENST00000451716 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms