RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 A0A096LNT2 108 aa11.17□□□□□ -0.62
CNOT3-204ENST00000447684 MAPK1IP1LQ8NDC0 245 aa11.17□□□□□ -0.62
CNOT3-204ENST00000447684 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
CNOT3-204ENST00000447684 CHD8Q9HCK8 2581 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 MXRA5Q9NR99 2828 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 B4DSR2 109 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 J3QLI3 93 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
CNOT3-204ENST00000447684 C6orf99Q4VX62 202 aa11.16□□□□□ -0.62
CNOT3-204ENST00000447684 POLQO75417 2590 aa11.15□□□□□ -0.62
CNOT3-204ENST00000447684 M0R2N4 97 aa11.15□□□□□ -0.62
CNOT3-204ENST00000447684 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
CNOT3-204ENST00000447684 LYPD5Q6UWN5 251 aa11.15□□□□□ -0.62
CNOT3-204ENST00000447684 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
CNOT3-204ENST00000447684 TRBV10-3A0A0K0K1G6 114 aa11.14□□□□□ -0.63
CNOT3-204ENST00000447684 PLA2G2AP14555 144 aa11.14□□□□□ -0.63
CNOT3-204ENST00000447684 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
CNOT3-204ENST00000447684 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
CNOT3-204ENST00000447684 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
CNOT3-204ENST00000447684 SCXQ7RTU7 201 aa11.13□□□□□ -0.63
CNOT3-204ENST00000447684 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
CNOT3-204ENST00000447684 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
CNOT3-204ENST00000447684 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
CNOT3-204ENST00000447684 FN1P02751 2386 aaKnown RBP11.12□□□□□ -0.63
CNOT3-204ENST00000447684 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
CNOT3-204ENST00000447684 PTPN13Q12923 2485 aa11.12□□□□□ -0.63
CNOT3-204ENST00000447684 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
CNOT3-204ENST00000447684 LINC00959A0A1B0GUT2 108 aa11.12□□□□□ -0.63
CNOT3-204ENST00000447684 FP248Q71RG6 208 aaPredicted RBP11.12□□□□□ -0.63
CNOT3-204ENST00000447684 CENPEQ02224 2701 aa11.12□□□□□ -0.63
CNOT3-204ENST00000447684 FBN2P35556 2912 aa11.12□□□□□ -0.63
CNOT3-204ENST00000447684 SMIM26A0A096LP01 95 aa11.11□□□□□ -0.63
CNOT3-204ENST00000447684 PRB1P04280 392 aa11.11□□□□□ -0.63
CNOT3-204ENST00000447684 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
CNOT3-204ENST00000447684 Q6ZQT0 140 aa11.11□□□□□ -0.63
CNOT3-204ENST00000447684 C9orf116Q5BN46 136 aaPredicted RBP11.1□□□□□ -0.63
CNOT3-204ENST00000447684 Q6ZVQ6 151 aa11.1□□□□□ -0.63
CNOT3-204ENST00000447684 C11orf44Q8N8P7 122 aa11.1□□□□□ -0.63
CNOT3-204ENST00000447684 BRK1Q8WUW1 75 aa11.1□□□□□ -0.63
CNOT3-204ENST00000447684 KLKP1Q107X0 134 aa11.1□□□□□ -0.63
CNOT3-204ENST00000447684 NBPF19A0A087WUL8 3843 aa11.09□□□□□ -0.63
CNOT3-204ENST00000447684 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
CNOT3-204ENST00000447684 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
CNOT3-204ENST00000447684 EPM2AB3EWF7 344 aa11.08□□□□□ -0.64
CNOT3-204ENST00000447684 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
CNOT3-204ENST00000447684 Q8N3U1 123 aa11.08□□□□□ -0.64
CNOT3-204ENST00000447684 LINC00482Q8N8I6 264 aa11.08□□□□□ -0.64
CNOT3-204ENST00000447684 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
CNOT3-204ENST00000447684 TRBV7-6A0A0J9YX20 115 aa11.07□□□□□ -0.64
CNOT3-204ENST00000447684 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
CNOT3-204ENST00000447684 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
CNOT3-204ENST00000447684 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
CNOT3-204ENST00000447684 A0A096LPF7 62 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 LINC00575Q6W349 94 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 SPATA3Q8NHX4 192 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
CNOT3-204ENST00000447684 GNLYP22749 145 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 WFDC10AQ9H1F0 79 aa11.05□□□□□ -0.64
CNOT3-204ENST00000447684 IGLV10-54A0A075B6I4 117 aa11.04□□□□□ -0.64
CNOT3-204ENST00000447684 Q8IZM0 81 aa11.04□□□□□ -0.64
CNOT3-204ENST00000447684 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
CNOT3-204ENST00000447684 LINC00269Q8N2A0 174 aa11.04□□□□□ -0.64
CNOT3-204ENST00000447684 Q6ZQY7 126 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 Q8NDZ9 215 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
CNOT3-204ENST00000447684 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 Q6YL49 198 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 C4orf3Q8WVX3 66 aa11.03□□□□□ -0.64
CNOT3-204ENST00000447684 NBEAL2Q6ZNJ1 2754 aa11.02□□□□□ -0.65
CNOT3-204ENST00000447684 ZFYVE26Q68DK2 2539 aa11.02□□□□□ -0.65
CNOT3-204ENST00000447684 SPTBN4Q9H254 2564 aa11.02□□□□□ -0.65
CNOT3-204ENST00000447684 MIFP14174 115 aa11.02□□□□□ -0.65
CNOT3-204ENST00000447684 BCE1O60756 84 aa11.01□□□□□ -0.65
CNOT3-204ENST00000447684 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
CNOT3-204ENST00000447684 FLNCQ14315 2725 aa11□□□□□ -0.65
CNOT3-204ENST00000447684 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
CNOT3-204ENST00000447684 NAV2Q8IVL1 2488 aa11□□□□□ -0.65
CNOT3-204ENST00000447684 LRRK2Q5S007 2527 aa11□□□□□ -0.65
CNOT3-204ENST00000447684 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
CNOT3-204ENST00000447684 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
CNOT3-204ENST00000447684 DSCR9P59020 149 aa10.99□□□□□ -0.65
CNOT3-204ENST00000447684 NF1P21359 2839 aa10.99□□□□□ -0.65
CNOT3-204ENST00000447684 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
CNOT3-204ENST00000447684 NREPQ16612 68 aa10.98□□□□□ -0.65
CNOT3-204ENST00000447684 GYPEP15421 78 aa10.98□□□□□ -0.65
CNOT3-204ENST00000447684 CXCL6P80162 114 aa10.97□□□□□ -0.65
CNOT3-204ENST00000447684 Q8N9L7 120 aa10.97□□□□□ -0.65
CNOT3-204ENST00000447684 TEX15Q9BXT5 2789 aa10.97□□□□□ -0.65
CNOT3-204ENST00000447684 GIG44P09565 113 aaPredicted RBP10.97□□□□□ -0.65
CNOT3-204ENST00000447684 NDUFC1O43677 76 aa10.96□□□□□ -0.65
CNOT3-204ENST00000447684 FAM229BQ4G0N7 80 aa10.96□□□□□ -0.65
CNOT3-204ENST00000447684 MUC7Q8TAX7 377 aa10.96□□□□□ -0.65
CNOT3-204ENST00000447684 TMEM254Q8TBM7 123 aa10.96□□□□□ -0.65
CNOT3-204ENST00000447684 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.66
CNOT3-204ENST00000447684 FSHBP01225 129 aa10.96□□□□□ -0.66
CNOT3-204ENST00000447684 ACACBO00763 2458 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms