RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 IGLV4-3A0A075B6K6 122 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 IGHV3-38A0A0C4DH36 116 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 RTL8CO15255 209 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 WT1-ASQ06250 92 aa5.85□□□□□ -1.47
MCF2L2-203ENST00000447025 IGHV3-72A0A0B4J1Y9 119 aa5.84□□□□□ -1.47
MCF2L2-203ENST00000447025 SLPIP03973 132 aa5.84□□□□□ -1.47
MCF2L2-203ENST00000447025 IGHV1-8P0DP01 117 aa5.84□□□□□ -1.47
MCF2L2-203ENST00000447025 ZNF462Q96JM2 2506 aa5.84□□□□□ -1.48
MCF2L2-203ENST00000447025 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV3-11P04433 115 aa5.83□□□□□ -1.48
MCF2L2-203ENST00000447025 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
MCF2L2-203ENST00000447025 MALRD1Q5VYJ5 2156 aa5.83□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 INAFM1C9JVW0 142 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 HIGD2BQ4VC39 106 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 CFAP46Q8IYW2 2715 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV3D-11A0A0A0MRZ8 115 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 IGHV3-73A0A0B4J1V6 119 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 MGPP08493 103 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 CCL3P10147 92 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 C1orf229Q6ZS94 237 aaPredicted RBP5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
MCF2L2-203ENST00000447025 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 COL6A6A6NMZ7 2263 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 IGFL4Q6B9Z1 124 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 SPTAN1Q13813 2472 aaKnown RBP5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 PCNX1Q96RV3 2341 aa5.81□□□□□ -1.48
MCF2L2-203ENST00000447025 CLPSL1A2RUU4 121 aa5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 LY6G6DO95868 133 aa5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 PRB1P04280 392 aa5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 TMEM167AQ8TBQ9 72 aa5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 XAGE1AQ9HD64 81 aa5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 FLNBO75369 2602 aaKnown RBP5.8□□□□□ -1.48
MCF2L2-203ENST00000447025 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 NTM-AS1Q6ZSK4 140 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV2-28A0A075B6P5 120 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV3D-15A0A087WSY6 115 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 IGKV2D-28P01615 120 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 IGHV3-53P01767 116 aa5.79□□□□□ -1.48
MCF2L2-203ENST00000447025 IGHV3OR16-8A0A075B7F1 116 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 CGB3P0DN86 165 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 CGB7P0DN87 165 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 GCN1Q92616 2671 aaKnown RBP5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 PLCE1Q9P212 2302 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 PRR4Q16378 134 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 DEFB114Q30KQ6 69 aa5.78□□□□□ -1.48
MCF2L2-203ENST00000447025 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV5-45A0A087WSX0 123 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 M0R2N4 97 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV1-47P01700 117 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 SPINK7P58062 85 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 LINC00315P59091 139 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 Q6ZR54 194 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 IGSF10Q6WRI0 2623 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 IGHV1-3A0A0C4DH29 117 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 NDUFA4O00483 81 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 CNEP1R1Q8N9A8 125 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 TTTY12Q9BZ98 90 aa5.77□□□□□ -1.49
MCF2L2-203ENST00000447025 PRB3Q04118 309 aaPredicted RBP5.76□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 IGKV1-17P01599 117 aa5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 IGKV3-15P01624 115 aa5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 FLNCQ14315 2725 aa5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 LINC01006Q8NI28 216 aa5.75□□□□□ -1.49
MCF2L2-203ENST00000447025 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 WFDC10AQ9H1F0 79 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 NAV2Q8IVL1 2488 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 SVEP1Q4LDE5 3571 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 IGLV9-49A0A0B4J1Y8 123 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 IGHV3-35A0A0C4DH35 117 aa5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 SPTBN1Q01082 2364 aaKnown RBP5.74□□□□□ -1.49
MCF2L2-203ENST00000447025 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 MAP1AP78559 2803 aaPredicted RBP5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 ROS1P08922 2347 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 TRGV2A0A075B6R0 118 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 F8W735 103 aaPredicted RBP5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 H3BQ85 93 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 C10orf55Q5SWW7 151 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 Q8NDZ9 215 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 COX7B2Q8TF08 81 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 CENPEQ02224 2701 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 MYO18BQ8IUG5 2567 aa5.73□□□□□ -1.49
MCF2L2-203ENST00000447025 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 IGHV3-15A0A0B4J1V0 119 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 ETDCA0A1B0GVM5 59 aa5.72□□□□□ -1.49
MCF2L2-203ENST00000447025 IGHV1-2P23083 117 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms