RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 LAMA4Q16363 1823 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 KIAA0100Q14667 2235 aaKnown RBP1.47□□□□□ -2.17
LINC00440-201ENST00000446579 LTN1O94822 1766 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 TRBV7-7A0A0K0K1E9 115 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 A0A1B0GWA3 101 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 MGPP08493 103 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 SAA2P0DJI9 122 aaPredicted RBP1.47□□□□□ -2.17
LINC00440-201ENST00000446579 S100A3P33764 101 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 SMIM11AP58511 58 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 DEFB106AQ8N104 65 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 PRO1933Q9H354 126 aa1.47□□□□□ -2.17
LINC00440-201ENST00000446579 ASCC3Q8N3C0 2202 aaKnown RBP1.47□□□□□ -2.17
LINC00440-201ENST00000446579 SIPA1L3O60292 1781 aaPredicted RBP1.47□□□□□ -2.17
LINC00440-201ENST00000446579 DDX60Q8IY21 1712 aaKnown RBP1.46□□□□□ -2.18
LINC00440-201ENST00000446579 TNRC6CQ9HCJ0 1690 aaKnown RBP1.46□□□□□ -2.18
LINC00440-201ENST00000446579 FAM223AQ8IWN6 122 aa1.46□□□□□ -2.18
LINC00440-201ENST00000446579 PAPPAQ13219 1627 aa1.46□□□□□ -2.18
LINC00440-201ENST00000446579 SCN11AQ9UI33 1791 aa1.46□□□□□ -2.18
LINC00440-201ENST00000446579 TOGARAM1Q9Y4F4 1720 aa1.46□□□□□ -2.18
LINC00440-201ENST00000446579 ESPL1Q14674 2120 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 BCORQ6W2J9 1755 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 TCHHQ07283 1943 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 ZNF815PA8K554 130 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 SYS1-DBNDD2H3BUS1 97 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 M0R3E3 92 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 SNRPGP62308 76 aaKnown RBP1.45□□□□□ -2.18
LINC00440-201ENST00000446579 RPL38P63173 70 aaKnown RBP1.45□□□□□ -2.18
LINC00440-201ENST00000446579 MARF1Q9Y4F3 1742 aaKnown RBP1.45□□□□□ -2.18
LINC00440-201ENST00000446579 ALS2Q96Q42 1657 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 PHIPQ8WWQ0 1821 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 SPTBP11277 2137 aa1.45□□□□□ -2.18
LINC00440-201ENST00000446579 FLG2Q5D862 2391 aaPredicted RBP1.44□□□□□ -2.18
LINC00440-201ENST00000446579 KIAA1551Q9HCM1 1747 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 SSC5DA1L4H1 1573 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 PDCD5O14737 125 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 PIN1P1O15428 100 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 TOMM5Q8N4H5 51 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 DOCK2Q92608 1830 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 SCN7AQ01118 1682 aa1.44□□□□□ -2.18
LINC00440-201ENST00000446579 RGPD8O14715 1765 aaPredicted RBP1.44□□□□□ -2.18
LINC00440-201ENST00000446579 COL14A1Q05707 1796 aaKnown RBP1.44□□□□□ -2.18
LINC00440-201ENST00000446579 PATJQ8NI35 1801 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 NHSQ6T4R5 1651 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 TRBV25-1A0A075B6N4 114 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 KANTRA0A1W2PQU2 76 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 SNRPGP15A8MWD9 76 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 LOC730098B7Z3J9 87 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 H7BZZ5 65 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 CCL22O00626 93 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 HMGN3Q15651 99 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 PSMG4Q5JS54 123 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 SMIM5Q71RC9 77 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 RPS27LQ71UM5 84 aaKnown RBP1.43□□□□□ -2.18
LINC00440-201ENST00000446579 PROK2Q9HC23 129 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 ABRACLQ9P1F3 81 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 NHSL1Q5SYE7 1610 aa1.43□□□□□ -2.18
LINC00440-201ENST00000446579 DDX60LQ5H9U9 1706 aaKnown RBP1.43□□□□□ -2.18
LINC00440-201ENST00000446579 FAM223BA6NKX1 122 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 CYB5AP00167 134 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 DEFA5Q01523 94 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 S100A16Q96FQ6 103 aaKnown RBP1.42□□□□□ -2.18
LINC00440-201ENST00000446579 C20orf78Q9BR46 151 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 Q9Y3F1 56 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 A0A1B0GUL6 1792 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 RGPD5Q99666 1765 aa1.42□□□□□ -2.18
LINC00440-201ENST00000446579 MYH8P13535 1937 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 FXYD6-FXYD2A0A087WZ82 144 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 C7orf77A4D0Y5 90 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 K7EP34 96 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 HAMPP81172 84 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 PEA15Q15121 130 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 FXYD6Q9H0Q3 95 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 SMCO4Q9NRQ5 59 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 ZNF831Q5JPB2 1677 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 RGPD2P0DJD1 1756 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 ANKRD36CQ5JPF3 1778 aa1.41□□□□□ -2.18
LINC00440-201ENST00000446579 ABCA3Q99758 1704 aa1.4□□□□□ -2.18
LINC00440-201ENST00000446579 FBN3Q75N90 2809 aa1.4□□□□□ -2.18
LINC00440-201ENST00000446579 DOCK1Q14185 1865 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 Q5BKY6 102 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 ALKAL2Q6UX46 152 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 UBE2DNLQ8IWF7 75 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 S100A13Q99584 98 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 PARP14Q460N5 1801 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 WNK3Q9BYP7 1800 aa1.4□□□□□ -2.19
LINC00440-201ENST00000446579 CPSF4LA6NMK7 179 aaKnown RBP1.39□□□□□ -2.19
LINC00440-201ENST00000446579 HMGN2P05204 90 aaKnown RBP1.39□□□□□ -2.19
LINC00440-201ENST00000446579 NMBP08949 121 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 Q6JHZ5 121 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 CMC2Q9NRP2 79 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 RABAC1Q9UI14 185 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 QSER1Q2KHR3 1735 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 NRAPQ86VF7 1730 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 DOT1LQ8TEK3 1739 aa1.39□□□□□ -2.19
LINC00440-201ENST00000446579 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
LINC00440-201ENST00000446579 LY75O60449 1722 aa1.38□□□□□ -2.19
LINC00440-201ENST00000446579 C10orf142B7Z368 130 aa1.38□□□□□ -2.19
LINC00440-201ENST00000446579 BCE1O60756 84 aa1.38□□□□□ -2.19
LINC00440-201ENST00000446579 CFDP00746 253 aaPredicted RBP1.38□□□□□ -2.19
LINC00440-201ENST00000446579 PRH1P02810 166 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms