RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 C2orf82Q6UX34 121 aa15.17■□□□□ 0.02
C9orf3-207ENST00000445181 PLAC8Q9NZF1 115 aa15.17■□□□□ 0.02
C9orf3-207ENST00000445181 Q8IZM0 81 aa15.16■□□□□ 0.02
C9orf3-207ENST00000445181 C6orf48Q9UBA6 75 aa15.16■□□□□ 0.02
C9orf3-207ENST00000445181 IGLV5-45A0A087WSX0 123 aa15.15■□□□□ 0.02
C9orf3-207ENST00000445181 H3BRM9 83 aa15.15■□□□□ 0.02
C9orf3-207ENST00000445181 FAM19A2Q8N3H0 131 aa15.15■□□□□ 0.02
C9orf3-207ENST00000445181 IGLC3P0DOY3 106 aa15.14■□□□□ 0.01
C9orf3-207ENST00000445181 MYCBP2O75592 4640 aa15.13■□□□□ 0.01
C9orf3-207ENST00000445181 TRBV30A0A0K0K1B3 111 aa15.13■□□□□ 0.01
C9orf3-207ENST00000445181 SMIM1B2RUZ4 78 aa15.13■□□□□ 0.01
C9orf3-207ENST00000445181 SERF1AO75920 110 aa15.13■□□□□ 0.01
C9orf3-207ENST00000445181 SPINK8P0C7L1 97 aa15.13■□□□□ 0.01
C9orf3-207ENST00000445181 RPL37AP61513 92 aaKnown RBP15.13■□□□□ 0.01
C9orf3-207ENST00000445181 IFI27L1Q96BM0 104 aa15.12■□□□□ 0.01
C9orf3-207ENST00000445181 J3QL48 77 aa15.11■□□□□ 0.01
C9orf3-207ENST00000445181 KRTAP10-4P60372 401 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-207ENST00000445181 C7orf33Q8WU49 177 aa15.11■□□□□ 0.01
C9orf3-207ENST00000445181 COX7B2Q8TF08 81 aa15.1■□□□□ 0.01
C9orf3-207ENST00000445181 HERC1Q15751 4861 aa15.09■□□□□ 0.01
C9orf3-207ENST00000445181 TLX1NBP0CAT3 122 aa15.09■□□□□ 0.01
C9orf3-207ENST00000445181 CHTOPQ9Y3Y2 248 aaKnown RBP15.09■□□□□ 0.01
C9orf3-207ENST00000445181 CXCL5P42830 114 aa15.08■□□□□ 0
C9orf3-207ENST00000445181 GAGE2EQ4V326 116 aa15.08■□□□□ 0
C9orf3-207ENST00000445181 Q6ZRP5 223 aa15.08■□□□□ 0
C9orf3-207ENST00000445181 GAGE2DQ9UEU5 116 aa15.08■□□□□ 0
C9orf3-207ENST00000445181 F8VRH5 84 aa15.07■□□□□ 0
C9orf3-207ENST00000445181 ZNF22P17026 224 aaPredicted RBP15.07■□□□□ 0
C9orf3-207ENST00000445181 LINC00310P59036 64 aa15.07■□□□□ 0
C9orf3-207ENST00000445181 C9orf116Q5BN46 136 aaPredicted RBP15.07■□□□□ 0
C9orf3-207ENST00000445181 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
C9orf3-207ENST00000445181 LEPROTL1O95214 131 aa15.06■□□□□ 0
C9orf3-207ENST00000445181 C11orf86A6NJI1 115 aa15.05■□□□□ -0
C9orf3-207ENST00000445181 KRTAP29-1A8MX34 341 aaPredicted RBP15.05■□□□□ -0
C9orf3-207ENST00000445181 NDUFC2-KCTD14E9PQ53 114 aa15.05■□□□□ -0
C9orf3-207ENST00000445181 TMEM170BQ5T4T1 132 aa15.05■□□□□ -0
C9orf3-207ENST00000445181 A0A1W2PNN7 141 aa15.04■□□□□ -0
C9orf3-207ENST00000445181 H0Y8G0 127 aa15.04■□□□□ -0
C9orf3-207ENST00000445181 NUPR1O60356 82 aa15.03■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BKO60814 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BJP06899 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BOP23527 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BBP33778 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BDP58876 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BCP62807 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST2H2BEQ16778 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BHQ93079 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BNQ99877 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 HIST1H2BMQ99879 126 aa15.02■□□□□ -0
C9orf3-207ENST00000445181 FABP4P15090 132 aa15.01□□□□□ -0.01
C9orf3-207ENST00000445181 HSPB8Q9UJY1 196 aa15.01□□□□□ -0.01
C9orf3-207ENST00000445181 IGLV5-39A0A0G2JS06 123 aa15□□□□□ -0.01
C9orf3-207ENST00000445181 S100A1P23297 94 aa14.99□□□□□ -0.01
C9orf3-207ENST00000445181 FAM168BA1KXE4 195 aa14.97□□□□□ -0.01
C9orf3-207ENST00000445181 FAM19A5Q7Z5A7 132 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-207ENST00000445181 ATP6V1G1O75348 118 aa14.95□□□□□ -0.02
C9orf3-207ENST00000445181 ODF1Q14990 250 aa14.94□□□□□ -0.02
C9orf3-207ENST00000445181 C9orf129Q5T035 196 aaKnown RBP14.94□□□□□ -0.02
C9orf3-207ENST00000445181 PHF5AQ7RTV0 110 aaKnown RBP14.94□□□□□ -0.02
C9orf3-207ENST00000445181 TMEM223A0PJW6 202 aa14.93□□□□□ -0.02
C9orf3-207ENST00000445181 OXTP01178 125 aa14.93□□□□□ -0.02
C9orf3-207ENST00000445181 HNRNPA3P51991 378 aaKnown RBP14.93□□□□□ -0.02
C9orf3-207ENST00000445181 XAGE1AQ9HD64 81 aa14.93□□□□□ -0.02
C9orf3-207ENST00000445181 PRR3P79522 188 aaKnown RBP14.92□□□□□ -0.02
C9orf3-207ENST00000445181 MAP1LC3CQ9BXW4 147 aa14.92□□□□□ -0.02
C9orf3-207ENST00000445181 PKHD1L1Q86WI1 4243 aa14.9□□□□□ -0.02
C9orf3-207ENST00000445181 PLNP26678 52 aa14.89□□□□□ -0.03
C9orf3-207ENST00000445181 M0QXV9 152 aa14.88□□□□□ -0.03
C9orf3-207ENST00000445181 PFN2P35080 140 aa14.88□□□□□ -0.03
C9orf3-207ENST00000445181 SFTA2Q6UW10 78 aa14.88□□□□□ -0.03
C9orf3-207ENST00000445181 ZNF625Q96I27 306 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-207ENST00000445181 PMCHL2Q9BQD1 86 aa14.87□□□□□ -0.03
C9orf3-207ENST00000445181 DPM2O94777 84 aa14.86□□□□□ -0.03
C9orf3-207ENST00000445181 KRTAP7-1Q8IUC3 87 aa14.85□□□□□ -0.03
C9orf3-207ENST00000445181 ERG28Q9UKR5 140 aa14.85□□□□□ -0.03
C9orf3-207ENST00000445181 LRP1Q07954 4544 aaKnown RBP14.84□□□□□ -0.03
C9orf3-207ENST00000445181 IGKCP01834 107 aa14.84□□□□□ -0.03
C9orf3-207ENST00000445181 UBE2BP63146 152 aa14.84□□□□□ -0.03
C9orf3-207ENST00000445181 SERTAD4-AS1Q5TG53 156 aa14.84□□□□□ -0.03
C9orf3-207ENST00000445181 PSORS1C2Q9UIG4 136 aa14.83□□□□□ -0.04
C9orf3-207ENST00000445181 COX17Q14061 63 aa14.82□□□□□ -0.04
C9orf3-207ENST00000445181 HERVK_113P61574 105 aa14.81□□□□□ -0.04
C9orf3-207ENST00000445181 COA6Q5JTJ3 125 aaKnown RBP14.81□□□□□ -0.04
C9orf3-207ENST00000445181 SYS1-DBNDD2H3BUS1 97 aa14.8□□□□□ -0.04
C9orf3-207ENST00000445181 C1orf137Q5JT78 98 aa14.8□□□□□ -0.04
C9orf3-207ENST00000445181 C22orf24Q9Y442 160 aa14.8□□□□□ -0.04
C9orf3-207ENST00000445181 FAT3Q8TDW7 4589 aa14.79□□□□□ -0.04
C9orf3-207ENST00000445181 LINC00158P58513 81 aa14.78□□□□□ -0.04
C9orf3-207ENST00000445181 LBHQ53QV2 105 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-207ENST00000445181 LEPROTO15243 131 aa14.77□□□□□ -0.05
C9orf3-207ENST00000445181 PLEKHB2Q96CS7 222 aa14.77□□□□□ -0.05
C9orf3-207ENST00000445181 NDUFA12Q9UI09 145 aa14.77□□□□□ -0.05
C9orf3-207ENST00000445181 SND1-IT1Q9HBX3 110 aa14.76□□□□□ -0.05
C9orf3-207ENST00000445181 A0A0U1RRA0 63 aa14.75□□□□□ -0.05
C9orf3-207ENST00000445181 MYMXA0A1B0GTQ4 84 aa14.75□□□□□ -0.05
C9orf3-207ENST00000445181 HERV-K104P63124 156 aa14.75□□□□□ -0.05
C9orf3-207ENST00000445181 MEIG1Q5JSS6 88 aa14.75□□□□□ -0.05
C9orf3-207ENST00000445181 MRPL55Q7Z7F7 128 aaKnown RBP14.75□□□□□ -0.05
C9orf3-207ENST00000445181 KRTAP11-1Q8IUC1 163 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms