RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PTPN13Q12923 2485 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 A0A087WSZ3 146 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 FHL3Q13643 280 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 Q9BRP9 147 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 ANKHD1Q8IWZ3 2542 aaKnown RBP5.56□□□□□ -1.52
RIF1-205ENST00000444746 SPINK1P00995 79 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 LINC00575Q6W349 94 aa5.56□□□□□ -1.52
RIF1-205ENST00000444746 EGFEM1PQ0D2K5 195 aa5.55□□□□□ -1.52
RIF1-205ENST00000444746 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
RIF1-205ENST00000444746 NUPR2A6NF83 97 aa5.55□□□□□ -1.52
RIF1-205ENST00000444746 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
RIF1-205ENST00000444746 COX17Q14061 63 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 C22orf24Q9Y442 160 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 LINC00846Q9NV44 126 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 X6R8D5 127 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
RIF1-205ENST00000444746 SEC61GP60059 68 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
RIF1-205ENST00000444746 COX8CQ7Z4L0 72 aa5.54□□□□□ -1.52
RIF1-205ENST00000444746 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
RIF1-205ENST00000444746 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
RIF1-205ENST00000444746 MDFIQ99750 246 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 CPAMD8Q8IZJ3 1885 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 ATRXP46100 2492 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 COL5A1P20908 1838 aaPredicted RBP5.53□□□□□ -1.52
RIF1-205ENST00000444746 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 FAM19A3Q7Z5A8 133 aa5.53□□□□□ -1.52
RIF1-205ENST00000444746 C1orf134Q5TEV5 83 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 PHF5AQ7RTV0 110 aaKnown RBP5.52□□□□□ -1.53
RIF1-205ENST00000444746 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 FAM19A4Q96LR4 140 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 EXPH5Q8NEV8 1989 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 ADAMTS20P59510 1910 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 SMCPP49901 116 aaPredicted RBP5.52□□□□□ -1.53
RIF1-205ENST00000444746 Q6JHZ5 121 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 C6orf48Q9UBA6 75 aa5.52□□□□□ -1.53
RIF1-205ENST00000444746 COX7CP15954 63 aa5.51□□□□□ -1.53
RIF1-205ENST00000444746 ST20-AS1Q8NBB2 130 aa5.51□□□□□ -1.53
RIF1-205ENST00000444746 NDUFC2O95298 119 aa5.51□□□□□ -1.53
RIF1-205ENST00000444746 ACACBO00763 2458 aa5.51□□□□□ -1.53
RIF1-205ENST00000444746 KRTAP10-3P60369 221 aa5.5□□□□□ -1.53
RIF1-205ENST00000444746 NAV2Q8IVL1 2488 aa5.5□□□□□ -1.53
RIF1-205ENST00000444746 WDR87Q6ZQQ6 2873 aa5.5□□□□□ -1.53
RIF1-205ENST00000444746 COL4A2P08572 1712 aa5.5□□□□□ -1.53
RIF1-205ENST00000444746 FAM168BA1KXE4 195 aa5.5□□□□□ -1.53
RIF1-205ENST00000444746 Q6ZVQ6 151 aa5.49□□□□□ -1.53
RIF1-205ENST00000444746 ZNF706Q9Y5V0 76 aaPredicted RBP5.49□□□□□ -1.53
RIF1-205ENST00000444746 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
RIF1-205ENST00000444746 ABCA2Q9BZC7 2435 aa5.49□□□□□ -1.53
RIF1-205ENST00000444746 LINC00167Q96N53 147 aa5.49□□□□□ -1.53
RIF1-205ENST00000444746 RPL37AP61513 92 aaKnown RBP5.49□□□□□ -1.53
RIF1-205ENST00000444746 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 CSDC2Q9Y534 153 aaKnown RBP5.48□□□□□ -1.53
RIF1-205ENST00000444746 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 IGHV3OR16-9A0A0B4J2B5 98 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 PSPHP1O15172 72 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 EIF4EBP3O60516 100 aaPredicted RBP5.48□□□□□ -1.53
RIF1-205ENST00000444746 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
RIF1-205ENST00000444746 A0A1B0GUV1 79 aa5.47□□□□□ -1.53
RIF1-205ENST00000444746 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
RIF1-205ENST00000444746 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
RIF1-205ENST00000444746 SPATA3Q8NHX4 192 aa5.46□□□□□ -1.53
RIF1-205ENST00000444746 A6NED7 52 aa5.46□□□□□ -1.53
RIF1-205ENST00000444746 EML5Q05BV3 1969 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 HCG22E2RYF7 251 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 KRTAP10-11P60412 298 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 MUC7Q8TAX7 377 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 NAV3Q8IVL0 2385 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 SPACA4Q8TDM5 124 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 LINC00474Q9P2X8 69 aa5.46□□□□□ -1.54
RIF1-205ENST00000444746 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
RIF1-205ENST00000444746 LINC00588Q9Y4M8 146 aa5.45□□□□□ -1.54
RIF1-205ENST00000444746 PTPRBP23467 1997 aa5.45□□□□□ -1.54
RIF1-205ENST00000444746 MOBPQ13875 183 aa5.44□□□□□ -1.54
RIF1-205ENST00000444746 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
RIF1-205ENST00000444746 FAM240AA0A1B0GVK7 77 aa5.44□□□□□ -1.54
RIF1-205ENST00000444746 Q8NAQ8 132 aa5.43□□□□□ -1.54
RIF1-205ENST00000444746 H0Y9P7 68 aa5.43□□□□□ -1.54
RIF1-205ENST00000444746 CACNA1AO00555 2505 aa5.43□□□□□ -1.54
RIF1-205ENST00000444746 CRYGAP11844 174 aa5.43□□□□□ -1.54
RIF1-205ENST00000444746 LINC01546A6NGU7 62 aa5.43□□□□□ -1.54
RIF1-205ENST00000444746 SONP18583 2426 aaKnown RBP5.43□□□□□ -1.54
RIF1-205ENST00000444746 SORL1Q92673 2214 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 PRYO14603 147 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 TRBV7-6A0A0J9YX20 115 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 HCFC1P51610 2035 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 IGKV2-30P06310 120 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 TRAV7A0A075B6U4 112 aa5.42□□□□□ -1.54
RIF1-205ENST00000444746 Q6ZRP5 223 aa5.41□□□□□ -1.54
RIF1-205ENST00000444746 MKI67P46013 3256 aaKnown RBP5.41□□□□□ -1.54
RIF1-205ENST00000444746 TRBV7-7A0A0K0K1E9 115 aa5.41□□□□□ -1.54
RIF1-205ENST00000444746 IMUPQ9GZP8 106 aa5.41□□□□□ -1.54
RIF1-205ENST00000444746 SERTAD4-AS1Q5TG53 156 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms