RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 Q8N3U1 123 aa10.69□□□□□ -0.7
SNX13-204ENST00000444712 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 KLK12Q9UKR0 248 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 CMYA5Q8N3K9 4069 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 IGLV10-54A0A075B6I4 117 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 H7C2G1 150 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 LINC00158P58513 81 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 CKS1BP61024 79 aa10.68□□□□□ -0.7
SNX13-204ENST00000444712 COX6CP09669 75 aa10.67□□□□□ -0.7
SNX13-204ENST00000444712 FOXI1Q12951 378 aa10.67□□□□□ -0.7
SNX13-204ENST00000444712 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
SNX13-204ENST00000444712 C15orf53Q8NAA6 179 aa10.67□□□□□ -0.7
SNX13-204ENST00000444712 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
SNX13-204ENST00000444712 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
SNX13-204ENST00000444712 RPL13AP40429 203 aaKnown RBP10.66□□□□□ -0.7
SNX13-204ENST00000444712 GAGE12HA6NDE8 117 aa10.65□□□□□ -0.7
SNX13-204ENST00000444712 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
SNX13-204ENST00000444712 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
SNX13-204ENST00000444712 K7ERU9 68 aa10.65□□□□□ -0.71
SNX13-204ENST00000444712 TCL1BO95988 128 aa10.65□□□□□ -0.71
SNX13-204ENST00000444712 COX17Q14061 63 aa10.65□□□□□ -0.71
SNX13-204ENST00000444712 ENHOQ6UWT2 76 aa10.65□□□□□ -0.71
SNX13-204ENST00000444712 ESRGQ1W209 222 aa10.64□□□□□ -0.71
SNX13-204ENST00000444712 OCIAD2Q56VL3 154 aa10.64□□□□□ -0.71
SNX13-204ENST00000444712 WFDC10BQ8IUB3 73 aa10.64□□□□□ -0.71
SNX13-204ENST00000444712 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
SNX13-204ENST00000444712 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
SNX13-204ENST00000444712 KIAA0087Q14695 138 aa10.63□□□□□ -0.71
SNX13-204ENST00000444712 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
SNX13-204ENST00000444712 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
SNX13-204ENST00000444712 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
SNX13-204ENST00000444712 TRIAP1O43715 76 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 LINC01556Q5JQF7 62 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 MUC7Q8TAX7 377 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 PRO0461Q9UI25 63 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 PFN2P35080 140 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 MDFIQ99750 246 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 SND1-IT1Q9HBX3 110 aa10.62□□□□□ -0.71
SNX13-204ENST00000444712 SPAG11BQ08648 103 aa10.6□□□□□ -0.71
SNX13-204ENST00000444712 WFDC2Q14508 124 aa10.6□□□□□ -0.71
SNX13-204ENST00000444712 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
SNX13-204ENST00000444712 CCL18P55774 89 aa10.59□□□□□ -0.71
SNX13-204ENST00000444712 M0QXV9 152 aa10.57□□□□□ -0.72
SNX13-204ENST00000444712 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
SNX13-204ENST00000444712 J3QR89 54 aa10.56□□□□□ -0.72
SNX13-204ENST00000444712 MTURNQ8N3F0 131 aa10.55□□□□□ -0.72
SNX13-204ENST00000444712 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
SNX13-204ENST00000444712 ANK2Q01484 3957 aa10.55□□□□□ -0.72
SNX13-204ENST00000444712 LINC01620Q4KN68 170 aa10.55□□□□□ -0.72
SNX13-204ENST00000444712 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
SNX13-204ENST00000444712 ETDBQ3ZM63 59 aa10.54□□□□□ -0.72
SNX13-204ENST00000444712 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 C9JAW5 83 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 LST1O00453 97 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 SLC25A20O43772 301 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 NDUFC2O95298 119 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
SNX13-204ENST00000444712 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
SNX13-204ENST00000444712 LINC00337Q8N6G1 96 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
SNX13-204ENST00000444712 F8WDY8 70 aa10.52□□□□□ -0.73
SNX13-204ENST00000444712 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
SNX13-204ENST00000444712 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
SNX13-204ENST00000444712 TENM3Q9P273 2699 aa10.52□□□□□ -0.73
SNX13-204ENST00000444712 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
SNX13-204ENST00000444712 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
SNX13-204ENST00000444712 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
SNX13-204ENST00000444712 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
SNX13-204ENST00000444712 TEN1Q86WV5 123 aa10.51□□□□□ -0.73
SNX13-204ENST00000444712 LINC00588Q9Y4M8 146 aa10.5□□□□□ -0.73
SNX13-204ENST00000444712 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
SNX13-204ENST00000444712 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
SNX13-204ENST00000444712 CLEC2BQ92478 149 aa10.5□□□□□ -0.73
SNX13-204ENST00000444712 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
SNX13-204ENST00000444712 IGKV2D-24A0A075B6R9 120 aa10.49□□□□□ -0.73
SNX13-204ENST00000444712 H3BT86 120 aa10.49□□□□□ -0.73
SNX13-204ENST00000444712 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
SNX13-204ENST00000444712 ANKRD29Q8N6D5 301 aa10.49□□□□□ -0.73
SNX13-204ENST00000444712 C2orf48Q96LS8 159 aa10.49□□□□□ -0.73
SNX13-204ENST00000444712 C9orf116Q5BN46 136 aaPredicted RBP10.48□□□□□ -0.73
SNX13-204ENST00000444712 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
SNX13-204ENST00000444712 RMI2Q96E14 147 aa10.48□□□□□ -0.73
SNX13-204ENST00000444712 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
SNX13-204ENST00000444712 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
SNX13-204ENST00000444712 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
SNX13-204ENST00000444712 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
SNX13-204ENST00000444712 VPS25Q9BRG1 176 aa10.47□□□□□ -0.73
SNX13-204ENST00000444712 H0YGX0 51 aa10.46□□□□□ -0.73
SNX13-204ENST00000444712 TRACP01848 142 aa10.46□□□□□ -0.73
SNX13-204ENST00000444712 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.74
SNX13-204ENST00000444712 LINC00526Q96FQ7 95 aa10.46□□□□□ -0.74
SNX13-204ENST00000444712 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
SNX13-204ENST00000444712 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
SNX13-204ENST00000444712 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
SNX13-204ENST00000444712 CBY1Q9Y3M2 126 aa10.45□□□□□ -0.74
SNX13-204ENST00000444712 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
SNX13-204ENST00000444712 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
SNX13-204ENST00000444712 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms